Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq754 118 9e-22 >seq754 Length=972672 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || || ||||| | || || | ||||| ||| | | Sbjct 126746 AATGCAGATTTTCGTTAAGACTTTGACCGGAAAGACCATCACGCTTGAAGTTGAGCCGAG 126687 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| |||| ||| | || || |||||| |||||||||||||| |||||||| || Sbjct 126686 CGACTCCATTGAGAATGTGAAGACAAAGATCCAAGACAAAGAAGGCATCCCTCCCGACCA 126627 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||||||||| | || ||||||||| | ||||||| | | | ||||| || || Sbjct 126626 ACAGAGACTGATCTTCGCTGGCAAGCAATTGGAAGATGGTCGCACTCTTAGCGACTACAA 126567 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| || || || || ||||| | ||||| Sbjct 126566 TATTCAGAAGGAGTCGACCCTTCATCTGGTGTT 126534 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || ||| | || || | ||||| || | | | Sbjct 126973 ATGCAGATCTTCGTGAAGACTCTGACCGGTAAAACTATCACTCTTGAAGTTGAACCAAGC 126914 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||| |||||| | || || |||||| |||||||||||||| || ||||||||| Sbjct 126913 GACAGTATCGAGAATGTGAAGACGAAGATTCAAGACAAAGAAGGCATCCCACCCGATCAA 126854 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || |||| || ||||| ||||| ||||||| | | | | || ||||||||| Sbjct 126853 CAGCGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGCCGTACTCTGAGTGATTATAAC 126794 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 ||||| ||||| || || |||| Sbjct 126793 ATTCAGAAAGAGTCCACTCTTCA 126771 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | || ||||| | || || ||||||||||| | | Sbjct 126290 AATGCAGATTTTCGTGAAGACTCTGACCGGAAAGACCATCACGCTCGAAGTCGAGCCGAG 126231 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| |||| || | || || ||||||| |||||||||||||| || || || || Sbjct 126230 CGACTCCATTGAAAATGTGAAGACAAAGATTCAAGACAAAGAAGGCATTCCCCCAGACCA 126171 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| ||||| | || ||| ||||| | ||||||| | | | ||||| || || Sbjct 126170 ACAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTTAGCGACTACAA 126111 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| || || || || ||||| | || || Sbjct 126110 TATTCAGAAGGAGTCGACCCTTCATCTGGTTTT 126078 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| | || || ||| | || || | ||||||||| | | | Sbjct 126517 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAAACCATCACGCTTGAAGTCGAGCCAAGC 126458 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| |||| || | || || ||||| ||||||||||| || || || || || Sbjct 126457 GACTCCATTGAAAATGTGAAGACGAAGATCCAGGACAAAGAAGGTATCCCCCCAGACCAG 126398 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | || ||| ||||| | ||||||| | | ||||||| || ||| Sbjct 126397 CAGAGGTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTCAGCGACTACAAC 126338 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 ||||||||||| || || |||| Sbjct 126337 ATTCAAAAAGAGTCCACTCTTCA 126315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429925871379615