Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq754 96.9 3e-15 >seq754 Length=972672 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| || || || ||||||| || ||||| || | ||| || || || Sbjct 126290 AATGCAGATTTTCGTGAAGACTCTGACCGGAAAGACCATCACGCTCGAAGTCGAGCCGAG 126231 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| || ||| | || || ||| ||| |||||||||||| ||||| || || Sbjct 126230 CGACTCCATTGAAAATGTGAAGACAAAGATTCAAGACAAAGAAGGCATTCCCCCAGACCA 126171 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| ||||| || | || || || || ||||||||| | ||| | ||| || || Sbjct 126170 ACAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTTAGCGACTACAA 126111 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| || || || || || || ||| | || |||||||| || || || Sbjct 126110 TATTCAGAAGGAGTCGACCCTTCATCTGGTTTTGCGTCTCCGTGGCGG 126063 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| || || || ||||||| || ||||| || | ||| || || || Sbjct 126746 AATGCAGATTTTCGTTAAGACTTTGACCGGAAAGACCATCACGCTTGAAGTTGAGCCGAG 126687 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| || ||| | || || ||| || |||||||||||| | || ||| || Sbjct 126686 CGACTCCATTGAGAATGTGAAGACAAAGATCCAAGACAAAGAAGGCATCCCTCCCGACCA 126627 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| || || || | || ||||| |||||||||||| | ||| | ||| || || Sbjct 126626 ACAGAGACTGATCTTCGCTGGCAAGCAATTGGAAGATGGTCGCACTCTTAGCGACTACAA 126567 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| || || || || || || ||| | ||||||||||| || || || Sbjct 126566 TATTCAGAAGGAGTCGACCCTTCATCTGGTGTTGCGTCTCCGTGGCGG 126519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423030033838600