Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq754 149 5e-31 >seq754 Length=972672 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | |||||| | ||| | || || || || ||||| ||||| ||| Sbjct 126060 ATACCGCCACGGAGACGCAAAACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCG 126119 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||| ||| |||||| | || || || ||| |||| || | ||||||||| || Sbjct 126120 CTAAGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGG 126179 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||||||| || | | ||||| || |||| | | ||| Sbjct 126180 GGAATGCCTTCTTTGTCTTGAATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCG 126239 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || ||||||||||| || || ||||||||||| Sbjct 126240 ACTTCGAGCGTGATGGTCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 141 bits (156), Expect = 8e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| |||||||| ||||| |||| |||||| ||||||||||||||| ||| Sbjct 126777 GTGGACTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTCAAGTTGTTTGCCA 126836 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | |||||||||||||| || || || |||||||||||||| |||||| || Sbjct 126837 GCGAAAATGAGACGCTGTTGATCGGGTGGGATGCCTTCTTTGTCTTGAATCTTCGTCTTC 126896 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | | ||| || || | || | ||||| ||||||||||| Sbjct 126897 ACATTCTCGATACTGTCGCTTGGTTCAACTTCAAGAGTGATAGTTTTACCGGTCAGAGTC 126956 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 126957 TTCACGAAGATCTGCATG 126974 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | ||| || | ||| | || || || || ||||| ||||| ||| Sbjct 126516 ATACCGCCACGGAGACGCAACACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCG 126575 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||| ||| |||||| | ||| || |||||| |||| || | ||||||||| ||| Sbjct 126576 CTAAGAGTGCGACCATCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGA 126635 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||||||||| |||||| || | | |||| || |||| | | || Sbjct 126636 GGGATGCCTTCTTTGTCTTGGATCTTTGTCTTCACATTCTCAATGGAGTCGCTCGGCTCA 126695 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || ||||||| ||| || || ||||||||||| Sbjct 126696 ACTTCAAGCGTGATGGTCTTTCCGGTCAAAGTCTTAACGAAAATCTGCAT 126745 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||||||||||||||| ||||| | ||| ||| |||||| | || || || Sbjct 126321 GTGGACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCATCTTCCAACTGCTTTCCG 126380 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | | ||| ||||| || || || ||||||||||| ||||| || Sbjct 126381 GCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGATCTTCGTCTTC 126440 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| || |||| | | ||||| || | || | |||||||||||||| ||| Sbjct 126441 ACATTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGGTTTTGCCGGTCAGGGTT 126500 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 126501 TTCACGAAGATCTGCAT 126517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420124502289996