Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq754 127 2e-24 >seq754 Length=972672 Score = 127 bits (140), Expect = 2e-24 Identities = 170/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | | ||| ||||||| ||||| || || ||||| ||||| || || Sbjct 126518 ACCGCCACGGAGACGCAACACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTC-GC 126576 Query 64276 GACG-GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAG 64334 | | ||||| | ||||| | |||||||| || | || || | ||| |||||||||| Sbjct 126577 TAAGAGTGCGACCATCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGAG 126636 Query 64335 GAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC-CGGCGTCC 64393 | || |||||||| ||||| || ||| ||| ||| ||| | | || | |||| || Sbjct 126637 GGATGCCTTCTTTGTCTTGGATCTTTGTCTTCACATTCTCAATGGAGTCGCTCGGC-TCA 126695 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| | || | |||||| ||||||||||| || |||||||| |||||| Sbjct 126696 ACTTCAAGCGTGATGGTCTTTCCGGTCAAAGTCTTAACGAAAATCTGCATT 126746 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || || ||||||||||||||||| || || ||||| | || Sbjct 126305 AAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCATC 126364 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||| ||||| | || | || ||||||||| || || || |||||||| || Sbjct 126365 TTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTC 126424 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | | || | | || ||||| | || | ||| Sbjct 126425 CTGGATCTTCGTCTTCACATTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGGT 126484 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| ||||| ||||| || ||||| Sbjct 126485 TTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 126517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499632727332520