Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq72 93.3 3e-14 >seq72 Length=792185 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 108447 ACAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC 108506 ||||||| |||| | |||| | || ||| | |||||||||||||| ||||| || Sbjct 413888 ACAGAACGACATCTTTGAATGGGCGAGAGACCACCGCGTTCACCACAAGTATTCTGAGAC 413947 Query 108507 GACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCAT 108566 | || ||||| |||||||| || || ||||||| ||||| ||||| || ||| | || Sbjct 413948 GGACGCGGACCCGCACAACGCAAAGAGAGGGTTCTTCTTCTCACACGTTGGGTGGTTAAT 414007 Query 108567 GATGACCAAGGACCCCGACGTGAT 108590 ||||| || ||||||| || || Sbjct 414008 GATGAAAAAACACCCCGATGTCAT 414031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381763806029352