Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq754 125 7e-24 >seq754 Length=972672 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||||||||| ||||| |||| | |||||| ||| || | ||| ||||| Sbjct 126321 GTGGACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCATCTTCCAACTGCTTTCCG 126380 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| | |||||| || || || || || || |||||| ||| ||| ||| Sbjct 126381 GCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGATCTTCGTCTTC 126440 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||| | || ||| | ||||||||| | || | |||||||||||||| ||| Sbjct 126441 ACATTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGGTTTTGCCGGTCAGGGTT 126500 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 126501 TTCACGAAGATCTGCAT 126517 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| |||| ||| | || ||||| || ||||||||||| |||| | |||||| | Sbjct 126075 CGCAAAACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCA 126134 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || | ||| ||||| ||| |||||| | ||| || || || || ||||| || ||| Sbjct 126135 TCTTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTG 126194 Query 127019 TCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 | | ||| | | || ||| | | ||| | || ||| | ||||||||||| || | Sbjct 126195 T-CTTGAATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGAT 126253 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||||||||| || || ||||||||||| Sbjct 126254 GGTCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||| ||| | || ||||| || ||||||||||| |||| | |||||| | Sbjct 126531 CGCAACACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCA 126590 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || | || || |||||| |||||| || ||| || |||||||| ||||| || ||| Sbjct 126591 TCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCTTCTTTG 126650 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || ||| | | || | || ||| | ||| ||||| | || | Sbjct 126651 TCTTGGATCTTTGTCTTCACATTCTCAATGGAGTCGCTCGGCTCAACTTCAAGCGTGATG 126710 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||||| ||| || || ||||||||||| Sbjct 126711 GTCTTTCCGGTCAAAGTCTTAACGAAAATCTGCAT 126745 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| ||||| || ||||| | || || || ||| || || ||||| ||| Sbjct 126777 GTGGACTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTCAAGTTGTTTGCCA 126836 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | ||||| |||||||| || ||||| || ||||| || ||| ||| Sbjct 126837 GCGAAAATGAGACGCTGTTGATCGGGTGGGATGCCTTCTTTGTCTTGAATCTTCGTCTTC 126896 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||| | || ||||| | || | ||||| ||||||||||| Sbjct 126897 ACATTCTCGATACTGTCGCTTGGTTCAACTTCAAGAGTGATAGTTTTACCGGTCAGAGTC 126956 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 126957 TTCACGAAGATCTGCATG 126974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475489310711920