Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq754 127 2e-24 >seq754 Length=972672 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | ||| || ||||| || || || ||||| || ||||| || ||| Sbjct 126060 ATACCGCCACGGAGACGCAAAACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCG 126119 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || | ||| ||||| || ||||| ||| | |||| | || ||||| || Sbjct 126120 CTAAGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGG 126179 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||||||||| |||||||| ||| || | ||| | || |||| | |||| Sbjct 126180 GGAATGCCTTCTTTGTCTTGAATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCG 126239 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || || ||||| ||||| || || ||||| ||||| Sbjct 126240 ACTTCGAGCGTGATGGTCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 111 bits (122), Expect = 1e-19 Identities = 167/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | |||||| ||||| || || || ||||| || ||||| || ||| Sbjct 126516 ATACCGCCACGGAGACGCAACACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCG 126575 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || | ||| |||||||| || || ||| | |||| || || ||||| || Sbjct 126576 CTAAGAGTGCGACCATCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGA 126635 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGC-TTCT--ACGGTGTCGGAAGAC 45287 || ||||||||||| ||||| | | ||||| | || | |||| | || |||| | | Sbjct 126636 GGGATGCCTTCTTTGTCTTGGA-TCTTTGTCT--TCACATTCTCAATGGAGTCGCTCGGC 126692 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || || | || || ||||| | ||| || || ||||| ||||| Sbjct 126693 TCAACTTCAAGCGTGATGGTCTTTCCGGTCAAAGTCTTAACGAAAATCTGCAT 126745 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || || ||||| || || || ||||||| || | ||| ||| Sbjct 126309 ACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCATCTTCC 126368 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || ||||| ||| | ||||| | |||||||| || || || |||||||| || || Sbjct 126369 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGG 126428 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || || | ||| | || |||| | ||||||||| || || | |||||| Sbjct 126429 ATCTTCGTCTTCACATTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGGTTTTG 126488 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||||| || ||||| || || || ||||| ||| || Sbjct 126489 CCGGTCAGGGTTTTCACGAAGATCTGCATACCGCCAC 126525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451992278472680