Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq552 95.1 2e-14 >seq552 Length=297145 Score = 95.1 bits (104), Expect = 2e-14 Identities = 316/486 (65%), Gaps = 8/486 (2%) Strand=Plus/Minus Query 159920 AGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATG 159979 ||||| ||||| || ||||| || || ||||||| || || ||||| || || | | Sbjct 246396 AGGCATGCAAAATCACAGTGAAGGCCTTCGTCCCTGGAAATCAACTCATTAGAAAATGTC 246337 Query 159980 AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAA 160039 || || ||||| | || | |||| ||||||||| | ||||| ||||| || Sbjct 246336 AGACCAGGCATTAGGCCTCTTTTCTTGATCCAAAAAATTGATGCAAACGCACCAGAGAAG 246277 Query 160040 AAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAG-AGGCGTTG--GTG 160096 || |||||||| || ||||||||||| || | || |||||||||| || || | | Sbjct 246276 AATATCCCCTCGACAGCCGCAAACGCAACAACTCTTTCACCAAAAGTAGCTGTAGAACTT 246217 Query 160097 TCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACG 160156 | || |||| | ||||| | ||||| ||| | || || | || | Sbjct 246216 TTATCCATCCATTTAAATGCCCACTGTGCCTTTTTTTTAACACAGGGGAAAGTTTCAATA 246157 Query 160157 GCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAG 160216 || || || | | |||| ||| ||| |||| ||| |||| | | || Sbjct 246156 GCATTGAAAACCTTCTCCTTCTCTCCTGGGTCCCTGATGTAAGTGTCAATTAACAGACAG 246097 Query 160217 TACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCC 160276 |||||||| | ||| | ||||| ||||| || ||||| ||||||| || | ||||| Sbjct 246096 TACATTTCGGAGTGAATGTTTTCCATGGCGATTTGAAATCCGTAGAAACATCTTGCCTCG 246037 Query 160277 AGATACTGCACCTCCTGTGTGAACCTTT-GACCCAGATTGGCATTAACCAACCCGTCGGC 160335 || || | |||| | |||||||| |||| || || | ||| | || || Sbjct 246036 GGAACTTGTATCTCCCGATAGAACCTTTCGACCAAG-TTCTCTCCAACTATGCCATCACT 245978 Query 160336 GGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTT 160395 ||| || ||||| |||| || || || ||||| ||| | || | ||| ||| || Sbjct 245977 GGCTGCGAAGAACGCCAGAACATGTGAAATGAACTGTTTTTCTTGAGAGTTCAGT---TT 245921 Query 160396 TTCCCA 160401 |||||| Sbjct 245920 TTCCCA 245915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795135987062480