Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq754 86.0 4e-12 >seq754 Length=972672 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || | ||| || || || | || | |||| ||||| || || |||||||| | Sbjct 126747 CCACCCCTCAAGCGAAGAACAAGGTGAAGAGTGGACTCTTTCTGAATGTTATAATCACTC 126806 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | || |||| || | |||||| || | ||||| | |||||| ||||| | || Sbjct 126807 AGAGTACGGCCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGATCGGGTGGG 126866 Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | |||||||||||| | || || | | || ||| |||||| || | ||| | Sbjct 126867 ATGCCTTCTTTGTCTTGAATCTTCGTCTTCACATTCTCGATACTGTCGCTTGG--TTCAA 126924 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 | || | ||| || |||||||| || | ||| || ||||||||||||||| Sbjct 126925 CTTCAAGAGTGATAGTTTTACCGGTCAGAGTCTTCACGAAGATCTGCATG 126974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347361416514989