Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq754 95.1 8e-15 >seq754 Length=972672 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||||| |||| || || |||||||| || ||||| ||| | || |||| Sbjct 126077 CAAAACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCATC 126136 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| ||| |||||||| || || || | || |||||| | || | || || ||||| Sbjct 126137 TTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTC 126196 Query 34889 GCTAATCTTCTGT-TTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| ||| || || | | || || || | | ||| || |||| || |||| Sbjct 126197 TTGAATCTT-TGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGATGG 126255 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || ||||||||||| || |||||||| Sbjct 126256 TCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| || |||| | | ||| | ||||| ||| ||||| |||||||| ||||| Sbjct 126289 TTCCACCTCTCAGACGAAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGC 126348 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 || | || |||| |||| ||| |||||||| || || | | ||||||||| | | Sbjct 126349 TGAGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGG 126408 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || ||||| |||||| || || | | || || || | | ||| | Sbjct 126409 GGATACCTTCTTTGTCCTGGATCTTCGTCTTCACATTTTCAATGGAGTCGCTTGGCTCGA 126468 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || |||||||| || || || || ||||| |||||||||||| Sbjct 126469 CTTCAAGCGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCATA 126518 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| |||||||| | | ||| | ||||| ||| ||||||||||||||||| || Sbjct 126745 TTCCACCCCTCAAGCGAAGAACAAGGTGAAGAGTGGACTCTTTCTGAATGTTATAATCAC 126804 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 || | || |||| || || ||||| || || || || || || || || || | | Sbjct 126805 TCAGAGTACGGCCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGATCGGGTG 126864 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCC 34928 | | || || ||||| ||||||| || || || | ||||| || | | Sbjct 126865 GGATGCCTTCTTTGTCTTGAATCTTCGTCTTCAC--AT--TCTCGATACTGTCGCTTGGT 126920 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || | || || ||||| || || ||||||||||| ||||||||||| Sbjct 126921 TCAACTTCAAGAGTGATAGTTTTACCGGTCAGAGTCTTCACGAAGATCTGCAT 126973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625952139624