Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq754 131 1e-25 >seq754 Length=972672 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || || || || | ||| | ||||| || || ||||| || || || ||||| Sbjct 126745 TTCCACCCCTCAAGCGAAGAACAAGGTGAAGAGTGGACTCTTTCTGAATGTTATAATCAC 126804 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| || | ||| || || || || || | ||||||||||||||| | Sbjct 126805 TCAGAGTACGGCCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGATCGGGTG 126864 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||||||||| |||||||| || || ||| | || | | |||| | ||| | Sbjct 126865 GGATGCCTTCTTTGTCTTGAATCTTCGTCTTCACATTCTCGATACTGTCGCTTGGTTCAA 126924 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||||||| ||||| ||||| | ||| || || || ||||||||| Sbjct 126925 CTTCAAGAGTGATAGTTTTACCGGTCAGAGTCTTCACGAAGATCTGCATG 126974 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| ||||| | ||||||||| || || || || |||||||| ||| | ||| | | Sbjct 126074 ACGCAAAACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACC 126133 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||| ||||| || || || |||| | |||||| || || |||||||||||||| Sbjct 126134 ATCTTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTT 126193 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||||| ||| || ||| |||| | | ||| || || ||||| || |||| Sbjct 126194 GTCTTGAATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGAT 126253 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| | ||| || || || |||||||| Sbjct 126254 GGTCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || | ||||||||| || || || || |||||||| ||| | ||| | | Sbjct 126530 ACGCAACACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACC 126589 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||||||||| || || || |||| | |||||| ||||| || ||||||||||| Sbjct 126590 ATCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCTTCTTT 126649 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||| || ||| | || | | ||| || || |||||||| |||| Sbjct 126650 GTCTTGGATCTTTGTCTTCACATTCTCAATGGAGTCGCTCGGCTCAACTTCAAGCGTGAT 126709 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| ||||| || || || |||||||| Sbjct 126710 GGTCTTTCCGGTCAAAGTCTTAACGAAAATCTGCAT 126745 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| | ||| | ||| | ||||| || || |||||||| || ||||| ||| Sbjct 126289 TTCCACCTCTCAGACGAAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGC 126348 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || ||| | |||| ||||| ||||| || || || ||||| | ||| || || || | Sbjct 126349 TGAGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGG 126408 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || |||||||| || || || || || ||| |||| | | ||| | || | Sbjct 126409 GGATACCTTCTTTGTCCTGGATCTTCGTCTTCACATTTTCAATGGAGTCGCTTGGCTCGA 126468 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||||| |||| ||||||||||| | ||||| || || |||||||| Sbjct 126469 CTTCAAGCGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 126517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396269064300081