Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq334 118 1e-21 >seq334 Length=611292 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 135408 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 135467 ||||||||||| | ||||| || || ||||| | | ||| || | ||| |||| ||| Sbjct 346969 CCCTTCACGCATAACACTTGTTTTAGCGTGTGAGCAACGTCTACCAAGTCACTCTGTGCC 346910 Query 135468 TCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCC 135527 ||||||| | ||||| ||||| || ||||| || ||||||| || ||| |||||||| Sbjct 346909 GCCATGACGTCATCGATATCCTTATACGCCATTGGTGTTTCGTCAATGACGTCAGCGTCC 346850 Query 135528 TTACGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGGTCGCCTTG 135587 ||||| ||||||||||| | || || || | || || || | || || | |||| Sbjct 346849 TTACGACACTCCACGCCTTGTGTCGCATTCACGTGATCATCAATTGTAAACATTTTCTTG 346790 Query 135588 GCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTG 135622 || | ||| || ||||| | | || || ||||| Sbjct 346789 GCTTTGGTTCGAGACATGCTTCTTCCTGCACCGTG 346755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700427875502520