Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq754 116 3e-21 >seq754 Length=972672 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || |||||||||||||| || || ||||| ||| | | | Sbjct 126973 ATGCAGATCTTCGTGAAGACTCTGACCGGTAAAACTATCACTCTTGAAGTTGAACCAAGC 126914 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || | || || ||||| |||||||||||||| || || ||||||||| Sbjct 126913 GACAGTATCGAGAATGTGAAGACGAAGATTCAAGACAAAGAAGGCATCCCACCCGATCAA 126854 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || || || ||||| || || ||| | | || ||||||||| Sbjct 126853 CAGCGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGCCGTACTCTGAGTGATTATAAC 126794 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || || || ||| | || | || ||| | || || Sbjct 126793 ATTCAGAAAGAGTCCACTCTTCACCTTGTTCTTCGCTTGAGGGGTGG 126747 Score = 107 bits (118), Expect = 2e-18 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || || || ||||||||||| || | | | Sbjct 126289 ATGCAGATTTTCGTGAAGACTCTGACCGGAAAGACCATCACGCTCGAAGTCGAGCCGAGC 126230 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | | |||| || || |||||| |||||||||||||| || || || || ||| Sbjct 126229 GACTCCATTGAAAATGTGAAGACAAAGATTCAAGACAAAGAAGGCATTCCCCCAGACCAA 126170 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | ||||||| ||||| || ||| |||| ||| ||| | | | | || || | Sbjct 126169 CAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCG-CACTCTTAGC-GACTACA 126112 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | ||||| ||||| ||||| || || |||| ||||| Sbjct 126111 ATATTCAGAAGGAGTCGACCCTTCATCTGGTTTTGCG 126075 Score = 107 bits (118), Expect = 2e-18 Identities = 151/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || ||||| ||||| || ||||| ||||| || | | | Sbjct 126517 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAAACCATCACGCTTGAAGTCGAGCCAAGC 126458 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | | |||| || || |||||||| ||||||||||| || || || || || Sbjct 126457 GACTCCATTGAAAATGTGAAGACGAAGATCCAGGACAAAGAAGGTATCCCCCCAGACCAG 126398 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCA--GATTA 24879 || | |||||||| ||||| || ||| |||| ||| ||| || | ||| || || Sbjct 126397 CAGAGGTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCG---CAC-TCTCAGCGACTA 126342 Query 24880 TAACATTCAAAAGGAATCGACACTACAC 24907 ||||||||||| || || || || ||| Sbjct 126341 CAACATTCAAAAAGAGTCCACTCTTCAC 126314 Score = 107 bits (118), Expect = 2e-18 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || | ||||| || || || ||||| ||||| || | | | Sbjct 126745 ATGCAGATTTTCGTTAAGACTTTGACCGGAAAGACCATCACGCTTGAAGTTGAGCCGAGC 126686 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | | || | || || ||||||||||||||||||||| || |||||||| ||| Sbjct 126685 GACTCCATTGAGAATGTGAAGACAAAGATCCAAGACAAAGAAGGCATCCCTCCCGACCAA 126626 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | ||||||| || || || || |||| ||| ||| | | | | || || | Sbjct 126625 CAGAGACTGATCTTCGCTGGCAAGCAATTGGAAGATGGTCG-CACTCTTAGC-GACTACA 126568 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | ||||| ||||| ||||| || || |||||||||| Sbjct 126567 ATATTCAGAAGGAGTCGACCCTTCATCTGGTGTTGCG 126531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886729349240