Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq754 114 8e-21 >seq754 Length=972672 Score = 114 bits (126), Expect = 8e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 ||||| |||| ||| |||||||||||| || ||||| || |||| |||| ||| Sbjct 126081 ACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCATCTTCC 126140 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||||||||||||||||| | || |||||| | || | || || ||||| || Sbjct 126141 AACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTC-TTG 126199 Query 34889 ATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 | | ||||| || || | | || || || | | |||||| || | || |||||||| Sbjct 126200 AATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGATGGTCTT 126259 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || ||||| || || |||||||| Sbjct 126260 TCCGGTCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| | || || ||||||| ||| ||| || |||||||| ||||| Sbjct 126289 TTCCACCTCTCAGACGAAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGC 126348 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 || |||| |||| |||| ||||||||||||||||||| | ||||||||| | | Sbjct 126349 TGAGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGG 126408 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | || || || || | | || || || | | ||||| Sbjct 126409 GGATACCTTCTTTGTCCTGGATCTTCGTCTTCACATTTTCAATGGAGTCGCTTGGCTCGA 126468 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| || ||||| || || || ||||| || || ||||||||||| Sbjct 126469 CTTCAAGCGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 126517 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 ||||| |||| ||| |||||||||||| || ||||| || |||| |||| ||| Sbjct 126537 ACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCATCTTCC 126596 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || ||||||||||||| || ||||| | || | || || ||||| | Sbjct 126597 AATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCTTCTTTGTCTTGG 126656 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 || ||| || || || || || || || | | ||| || |||| || ||||||| Sbjct 126657 ATCTTTGTCTTCAC--ATTCTCAATGGAGTCGCTCGGCTCAACTTCAAGCGTGATGGTCT 126714 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || | ||||| || || |||||||| Sbjct 126715 TTCCGGTCAAAGTCTTAACGAAAATCTGCAT 126745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325685127186527