Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq334 84.2 6e-12 >seq334 Length=611292 Score = 84.2 bits (92), Expect = 6e-12 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 37287 TTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGT 37346 ||| ||||||||||| || ||| ||| || || |||| || ||| ||| | Sbjct 346748 TTGTAGCCACGGTGCAGGAAGAAGCATGTCTCGAACCAAAGCCAAGAAAATGTTTACAAT 346807 Query 37347 CGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGA 37406 || ||||| | | || || |||| | ||||| || || || || || || || || Sbjct 346808 TGATGATCACGTGAATGCGACACAAGGCGTGGAGTGTCGTAAGGACGCTGACGTCATTGA 346867 Query 37407 CGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGT 37466 ||| || ||| ||| || ||||| ||||||| |||||||| || || | | |||| Sbjct 346868 CGAAACACCAATGGCGTATAAGGATATCGATGACGTCATGGCGGCACAGAGTGACTTGGT 346927 Query 37467 GGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGGTTGA 37512 ||| | | |||||||| ||||| | ||||||||||| ||| Sbjct 346928 AGACGTTGCTCACACGCTAAAACAAGTGTTATGCGTGAAGGGATGA 346973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139280002841196