Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq754 138 1e-27 >seq754 Length=972672 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| |||||||| |||| | ||| ||| | || || | | Sbjct 126542 ATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCA-TCTTCCAATT 126600 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || || | ||| |||||||||||||||||||| ||||| ||||| Sbjct 126601 GCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCTTCTTTGTCTTGGATCT 126660 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||| | | ||||| | |||| | ||||| || || | |||| ||| || |||| Sbjct 126661 TTGTCTTCACATTCTCAATGGAGTCGCTCGGCTCAACTTCAAGCGTGATGGTCTTTCCGG 126720 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| || |||||||||||||| Sbjct 126721 TCAAAGTCTTAACGAAAATCTGCAT 126745 Score = 129 bits (142), Expect = 6e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| |||||||| |||| | ||| ||| | || || | || Sbjct 126086 ATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCA-TCTTCCAACT 126144 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | || |||| ||| ||||| || || |||||||| ||||| |||| Sbjct 126145 GCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCTTGAATCT 126204 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||| | | |||| | |||| | ||||| || |||| |||| ||| || |||| Sbjct 126205 TTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGATGGTCTTTCCGG 126264 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||| || |||||||||||||| Sbjct 126265 TCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||| || || ||||| |||| | ||| ||| | || || | |||||| || Sbjct 126321 GTGGACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCA-TCTTCCAACTGCTTTCC 126379 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || ||||||||| || ||||| ||||| ||||| |||||| ||| Sbjct 126380 GGCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGATCTTCGTCTT 126439 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| | |||| | ||||| || || | |||| ||||||||||||||| || Sbjct 126440 CACATTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGGTTTTGCCGGTCAGGGT 126499 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 126500 TTTCACGAAGATCTGCAT 126517 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || || ||||| | || || | | | || || || || ||||| Sbjct 126777 GTGGACTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCA-TCTTCAAGTTGTTTGCC 126835 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||| Sbjct 126836 AGCGAAAATGAGACGCTGTTGATCGGGTGGGATGCCTTCTTTGTCTTGAATCTTCGTCTT 126895 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | ||||| | || || || || | |||| ||||| ||||||||||| Sbjct 126896 CACATTCTCGATACTGTCGCTTGGTTCAACTTCAAGAGTGATAGTTTTACCGGTCAGAGT 126955 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 126956 CTTCACGAAGATCTGCATG 126974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483409119344920