Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq754 136 4e-27 >seq754 Length=972672 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||||| ||| | | | ||||| || ||||| ||||||||||| | || || | Sbjct 126075 CGCAAAACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCA 126134 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||| || |||| |||| || | |||||| ||||| || ||||||||||| Sbjct 126135 TCTTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTG 126194 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| ||| |||| | ||| | | ||| ||||||| ||||||| ||| | Sbjct 126195 TCTTGAATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGATG 126254 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||||||| || | |||||||||||| Sbjct 126255 GTCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| |||||||| || || |||| ||||| |||||| || ||||| || | Sbjct 126780 GACTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTCAAGTTGTTTGCCAGCG 126839 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || |||||||||||||| || || ||||||||||| || ||| || |||| Sbjct 126840 AAAATGAGACGCTGTTGATCGGGTGGGATGCCTTCTTTGTCTTGAATCTTCGTCTTCACA 126899 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | | | ||| | || || ||||| | || | |||||||| |||||||| || Sbjct 126900 TTCTCGATACTGTCGCTTGGTTCAACTTCAAGAGTGATAGTTTTACCGGTCAGAGTCTTC 126959 Query 132110 ATGAAAATCTGCATGA 132125 | ||| |||||||||| Sbjct 126960 ACGAAGATCTGCATGA 126975 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||| ||| | | | ||||| || ||||| ||||||||||| | || || | Sbjct 126531 CGCAACACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCA 126590 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | || || || | |||| || | |||||| || ||||| ||||||||||| Sbjct 126591 TCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCTTCTTTG 126650 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| |||| | || | | ||| ||||||| ||||| | ||| | Sbjct 126651 TCTTGGATCTTTGTCTTCACATTCTCAATGGAGTCGCTCGGCTCAACTTCAAGCGTGATG 126710 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| ||| || | |||||||||||| Sbjct 126711 GTCTTTCCGGTCAAAGTCTTAACGAAAATCTGCAT 126745 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||||||||||||||||||||| | || || |||||| | ||| || |||| Sbjct 126324 GACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCATCTTCCAACTGCTTTCCGGCG 126383 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | ||| || ||||| || || |||||||| || || || |||| Sbjct 126384 AAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGATCTTCGTCTTCACA 126443 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | | ||| | ||||| ||||| | ||| | ||||| || ||||| ||||| Sbjct 126444 TTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGGTTTTGCCGGTCAGGGTTTTC 126503 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 126504 ACGAAGATCTGCAT 126517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476599683881880