Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq754 105 6e-18 >seq754 Length=972672 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || |||||| | || || || || | ||||| ||| | ||||| | ||||| ||| | Sbjct 126977 CATCATGCAGATCTTCGTGAAGACTCTGACCGGTAAAACTATCACTCTTGAAGTTGAACC 126918 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||| | ||||||| | || || || ||| || ||||| || || || ||||| Sbjct 126917 AAGCGACAGTATCGAGAATGTGAAGACGAAGATTCAAGACAAAGAAGGCATCCCACCCGA 126858 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| || | ||||||| || ||||||||||| ||||||| | | | | || ||||| Sbjct 126857 TCAACAGCGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGCCGTACTCTGAGTGATTA 126798 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||||| ||||| ||||| |||| | || | | ||||| || |||| Sbjct 126797 TAACATTCAGAAAGAGTCCACTCTTCACCTTGTTCTTCGCTTGAGGGGTGGAA 126745 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || || |||||||| | |||||| | ||||| || | | | Sbjct 126745 ATGCAGATTTTCGTTAAGACTTTGACCGGAAAGACCATCACGCTTGAAGTTGAGCCGAGC 126686 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || | || ||| | || || ||| || || ||||| || || || ||||| || Sbjct 126685 GACTCCATTGAGAATGTGAAGACAAAGATCCAAGACAAAGAAGGCATCCCTCCCGACCAA 126626 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||||| || | || ||||| ||| | ||||||| | | | | | ||||| |||||| Sbjct 126625 CAGAGACTGATCTTCGCTGGCAAGCAATTGGAAGATGGTCGCACTCTTAGCGACTACAAT 126566 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 ||||| || || || ||| ||||| | ||||| Sbjct 126565 ATTCAGAAGGAGTCGACCCTTCATCTGGTGTT 126534 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA- 25233 ||||| | || || ||||| | ||||| ||| | |||||| | |||||||| ||||| Sbjct 126517 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAAACCATCACGCTTGAAGTCGA-GCCAAG 126459 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||| | || || | || || || || || ||||| ||||| || || || || Sbjct 126458 CGACTCCATTGAAAATGTGAAGACGAAGATCCAGGACAAAGAAGGTATCCCCCCAGACCA 126399 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| || | || | || ||| || || | ||||||| | | | | ||||||| ||||| Sbjct 126398 GCAGAGGTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTCAGCGACTACAA 126339 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||||||||||| ||||| |||| | || | | ||||||| |||| Sbjct 126338 CATTCAAAAAGAGTCCACTCTTCACCTTGTTCTTCGTCTGAGAGGTGGAA 126289 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || | |||||||| | |||||| |||||||||| | | | Sbjct 126289 ATGCAGATTTTCGTGAAGACTCTGACCGGAAAGACCATCACGCTCGAAGTCGAGCCGAGC 126230 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || | || || | || || ||| ||| || ||||| || || || || || || Sbjct 126229 GACTCCATTGAAAATGTGAAGACAAAGATTCAAGACAAAGAAGGCATTCCCCCAGACCAA 126170 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || || || | || ||| || || | ||||||| | | | | | ||||| |||||| Sbjct 126169 CAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTTAGCGACTACAAT 126110 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 ||||| || || || ||| ||||| | || || Sbjct 126109 ATTCAGAAGGAGTCGACCCTTCATCTGGTTTT 126078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445083645406560