Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq754 122 7e-23 >seq754 Length=972672 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| ||||| || || || |||| | || | ||||| || ||||| || Sbjct 126777 GTGGACTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTCAAGTTGTTTGCCA 126836 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||||||||||||||| || || | || ||||| || ||||| | ||| Sbjct 126837 GCGAAAATGAGACGCTGTTGATCGGGTGGGATGCCTTCTTTGTCTTGAATCTTCGTCTTC 126896 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | | |||| | | ||||||||| ||||| |||| ||| || |||||||| Sbjct 126897 ACATTCTCGATACTGTCGCTTGGTTCAACTTCAAGAGTGATAGTTTTACCGGTCAGAGTC 126956 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 126957 TTCACGAAGATCTGCAT 126973 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||||||||| ||||||||||| | |||| | ||||| | ||| || ||| Sbjct 126321 GTGGACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCATCTTCCAACTGCTTTCCG 126380 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | | ||| || || || || | ||| ||||| || |||||| | ||| Sbjct 126381 GCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGATCTTCGTCTTC 126440 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | | ||| | | || ||||| || || || | |||||| ||||| ||| Sbjct 126441 ACATTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGGTTTTGCCGGTCAGGGTT 126500 Query 27231 TTCACAAAGATTTGCATA 27248 ||||| ||||| |||||| Sbjct 126501 TTCACGAAGATCTGCATA 126518 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| |||| ||| | || || || || ||||||||||||||||| | |||| | Sbjct 126075 CGCAAAACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCA 126134 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | ||| || |||||| | || || | |||||| || || || | || ||||| Sbjct 126135 TCTTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTG 126194 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| | |||| |||| | | ||| | | || ||||| || || || Sbjct 126195 TCTTGAATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGATG 126254 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || |||||||| ||||| || || ||||| Sbjct 126255 GTCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 126289 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| |||| ||| | || || || || ||||||||||||||||| | |||| | Sbjct 126531 CGCAACACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCA 126590 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || || || ||| | || || | |||||| || || || | || ||||| Sbjct 126591 TCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCTTCTTTG 126650 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| | |||| | || | | ||| | | |||||||| || || || Sbjct 126651 TCTTGGATCTTTGTCTTCACATTCTCAATGGAGTCGCTCGGCTCAACTTCAAGCGTGATG 126710 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || |||| ||| || || || || ||||| Sbjct 126711 GTCTTTCCGGTCAAAGTCTTAACGAAAATCTGCAT 126745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424924389209496