Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq552 98.7 1e-15 >seq552 Length=297145 Score = 98.7 bits (108), Expect = 1e-15 Identities = 188/275 (68%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| || || ||||| | ||| || | ||||| || || |||||| Sbjct 246390 GCAAAATCACAGTGAAGGCCTTCGTCCCTGGAAATCAACTCATTAGAAAATGTCAGACCA 246331 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| || || | ||||| | ||| ||||| | ||| | ||||||||||| ||| Sbjct 246330 GGCATTAGGCCTCTTTTCTTGATCCAAAAAATTGATGCAAACGCACCAGAGAAGAATATC 246271 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGG--GACTTTGTATCA 130192 ||||| ||| ||| ||||||| | | ||| | |||| ||| | || || |||| Sbjct 246270 CCCTCGACAGCCGCAAACGCAACAACTCTTTCACCAAAAGTAGCTGTAGAACTTTTATCC 246211 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| || | |||||||| |||||||| | | ||| |||| || | || || | Sbjct 246210 ATCCATTTAAATGCCCACTGTGCCTTTTTTTTAACACAGGGGAAAGTTTCAATAGCATTG 246151 Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTA 130287 || | | || ||| ||| ||| || ||||||| Sbjct 246150 AAAACCTTCTCCTTCTCTCCTGGGTCCCTGATGTA 246116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420257059480