Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq754 167 2e-36 >seq754 Length=972672 Score = 167 bits (184), Expect = 2e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||| ||| | || || |||||||| || ||| | Sbjct 126745 ATGCAGATTTTCGTTAAGACTTTGACCGGAAAGACCATCACGCTTGAAGTTGAGCCGAGC 126686 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| ||||||| || || ||| || ||||||||||||||||| || ||||| ||| Sbjct 126685 GACTCCATTGAGAATGTGAAGACAAAGATCCAAGACAAAGAAGGCATCCCTCCCGACCAA 126626 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| ||||| ||||||||||| || || || ||| ||||| Sbjct 126625 CAGAGACTGATCTTCGCTGGCAAGCAATTGGAAGATGGTCGCACTCTTAGCGACTACAAT 126566 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||||||| | ||| |||| |||||| | || || || || Sbjct 126565 ATTCAGAAGGAGTCGACCCTTCATCTGGTGTTGCGTCTCCGTGGCGGTAT 126516 Score = 163 bits (180), Expect = 2e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||| ||| | || || || ||||| || ||| | Sbjct 126289 ATGCAGATTTTCGTGAAGACTCTGACCGGAAAGACCATCACGCTCGAAGTCGAGCCGAGC 126230 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| ||||| | || || ||| |||||||||||||||||||| || || || ||| Sbjct 126229 GACTCCATTGAAAATGTGAAGACAAAGATTCAAGACAAAGAAGGCATTCCCCCAGACCAA 126170 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| || || |||||||| || || || ||| ||||| Sbjct 126169 CAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTTAGCGACTACAAT 126110 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||||||| | ||| ||||||||||| | || || || || Sbjct 126109 ATTCAGAAGGAGTCGACCCTTCATCTGGTTTTGCGTCTCCGTGGCGGTAT 126060 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || ||||||||||| || |||| ||||||||||| ||||| Sbjct 126974 CATGCAGATCTTCGTGAAGACTCTGACCGGTAAAACTATCACTCTTGAAGTTGAACCAAG 126915 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| || |||| || || || |||||||||||||||||||| ||||||||||| Sbjct 126914 CGACAGTATCGAGAATGTGAAGACGAAGATTCAAGACAAAGAAGGCATCCCACCCGATCA 126855 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||||| | || | ||| ||||||||| | ||||| | || | ||||| || Sbjct 126854 ACAGCGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGCCGTACTCTGAGTGATTATAA 126795 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || ||||| || | || | ||| | || ||| ||||||| || Sbjct 126794 CATTCAGAAAGAGTCCACTCTTCACCTTGTTCTTCGCTTGAGGGGTGGAAT 126744 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| ||||||||||| | || || |||||||| || || | Sbjct 126517 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAAACCATCACGCTTGAAGTCGAGCCAAGC 126458 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| ||||| | || || || || || ||||||||||| || || || || || Sbjct 126457 GACTCCATTGAAAATGTGAAGACGAAGATCCAGGACAAAGAAGGTATCCCCCCAGACCAG 126398 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || || |||||||| || || | ||| |||||| Sbjct 126397 CAGAGGTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTCAGCGACTACAAC 126338 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| ||||| || | || | ||| | ||| || | ||||| || Sbjct 126337 ATTCAAAAAGAGTCCACTCTTCACCTTGTTCTTCGTCTGAGAGGTGGAAT 126288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434907891284160