Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq754 131 4e-25 >seq754 Length=972672 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| |||||||| |||||||| || ||||| ||||| | ||| | |||||| Sbjct 126762 AGAACAAGGTGAAGAGTGGACTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCT 126821 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || ||||| || || | ||| || || | | ||| ||||| || ||| Sbjct 126822 TCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGATCGGGTGGGATGCCTTCTTTGTCT 126881 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| |||| | ||||| || ||||||||||| |||||| Sbjct 126882 TGAATCTTCGTCTTCACATTCTCGATACTGTCGCTTGGTTCAACTTCAAGAGTGATAGTT 126941 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||||||||||| |||||| Sbjct 126942 TTACCGGTCAGAGTCTTCACGAAGATCTGCAT 126973 Score = 129 bits (142), Expect = 1e-24 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| |||||||| ||||||||||| |||||||| ||| | ||| | |||||| Sbjct 126306 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCATCT 126365 Query 151953 TCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || | ||||| ||||||||||| | |||||||||||| | | ||| ||||| || | Sbjct 126366 TCCAACTGCTTT--CCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGT 126423 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || || ||| | || | | ||| ||| |||||||| || || | Sbjct 126424 CCTGGATCTTCGTCTTCACATTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGG 126483 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||| || || || |||||||||| |||||| Sbjct 126484 TTTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 126517 Score = 114 bits (126), Expect = 3e-20 Identities = 156/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCATCTTC 151954 || |||||||| || ||||| || || || ||||| ||| |||| ||| | |||||||| Sbjct 126081 ACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCG-CTAAGAGTGCGACCATCTTC 126139 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 | ||||| ||||||||||| |||||||| ||||| | | || ||||| || ||| Sbjct 126140 CAACTGCTTT--CCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCT 126197 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| || ||| | || | | ||| ||| ||||| || || || || Sbjct 126198 TGAATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGATGGTC 126257 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || |||||||||||||| | ||||||| Sbjct 126258 TTTCCGGTCAGAGTCTTCACGAAAATCTGCATT 126290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153792223825043