Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AC_000005.1 Length=34125 Score E Sequences producing significant alignments: (Bits) Value seq59402 136 9e-28 >seq59402 Length=222 Score = 136 bits (150), Expect = 9e-28 Identities = 156/205 (76%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 6410 CGGCCAATGCCCGCTCATAGGGGTTAAGGGGAGGACCCCAAGGCATGGGGTGTGTGAGGG 6469 |||| | || ||||| || ||||| || || |||||||| ||||||||||| ||||| | Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGG-GGACCCCATGGCATGGGGTG-GTGAGCG 58 Query 6470 CCGATGCATACATGCCGCAAATATCATATACATATATGGGCTCTTTTAGTACTCCTATGT 6529 | || || |||||||||||||| || || || || | ||||||| | |||| ||| | | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6530 AAGTAGGATAGCACCTGCCGCCACGAATGCTGGCGCGAACGTAGTCATATAGCTCATGTG 6589 | ||||| ||||| || | | || ||||||||||| ||||| || ||||| || || | Sbjct 119 ATGTAGG-TAGCATCT--CCACGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6590 AAGGCGCCAGGATGTTGGGCCCAAG 6614 | || || |||| || ||| || || Sbjct 176 AGGGAGCGAGGAGGTCGGGACCGAG 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109000444599002