Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AC_000011.1 Length=36519 Score E Sequences producing significant alignments: (Bits) Value seq59402 185 2e-42 >seq59402 Length=222 Score = 185 bits (204), Expect = 2e-42 Identities = 177/222 (80%), Gaps = 5/222 (2%) Strand=Plus/Plus Query 6538 CGGCCAGCGCGCGCTCGTAGGGACTGAGGGGCGTGCCCCAGGGCATGGGATGGGTAAGCG 6597 |||| |||||||||||||| || |||| || | ||||| |||||||| ||| | |||| Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGA-CCCCATGGCATGGGGTGG-TGAGCG 58 Query 6598 CGGAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGGCTCCTCGAGGATGCCGATGT 6657 ||||||||||||||||||| |||||||| |||||||||||||| ||| || || | | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6658 AGGTGGGGTAGCAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTCATACAGCTCGTGCG 6717 | || || ||||| | || | ||||||||||||||||||||| || || || ||||||| Sbjct 119 ATGTAGG-TAGCATCTCCAC--GCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6718 AGGGGGCGAGGAGCCCCGGGCCCAGGTTGGTGCGACTGGGCT 6759 |||| |||||||| | || || |||||| | || ||||| Sbjct 176 AGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCT 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116655769631126