Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AC_000189.1 Length=34094 Score E Sequences producing significant alignments: (Bits) Value seq59402 86.0 1e-12 >seq59402 Length=222 Score = 86.0 bits (94), Expect = 1e-12 Identities = 120/162 (74%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 6735 GGGGTGGGTGAGGGCGCTGGCATACATGCCGCAGATGTCATAGACGTAGAGGGGCTCCCG 6794 ||||||| |||| ||| ||| ||||||||||| ||||| || |||||||||||||| | Sbjct 46 GGGGTGG-TGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCT 104 Query 6795 CAGGAGGCCGATGAAGTTGGGGTAGCAGCGGCCGCCGCGCAGGCTCTTCGCGGACGTAGT 6854 || | || | || | ||||||| | | |||| | ||| |||| ||||| | Sbjct 105 GAGTATTCC-AAGATATGTAGGTAGCATC--TCCACGCGGATGCT-GGCGCGCACGTAAT 160 Query 6855 CATACAGCTCGTGGGAGGGCGCGAGGAGGTTCGG-CCGAGGT 6895 | || || ||||| ||||| |||||||||| || ||||||| Sbjct 161 CGTATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108901315494576