Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_001405.1 Length=35937 Score E Sequences producing significant alignments: (Bits) Value seq59402 369 8e-98 >seq59402 Length=222 Score = 369 bits (408), Expect = 8e-98 Identities = 222/227 (98%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 6647 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTGGGTGAGCG 6706 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGG-ACCCCATGGCATGGGGTGG-TGAGCG 58 Query 6707 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 6766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6767 ATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 6826 ||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 119 ATGTAGG-TAGCATCT-CCAC-GCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6827 AGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCT 6873 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176 AGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCT 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114794700638354