Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_001454.1 Length=34214 Score E Sequences producing significant alignments: (Bits) Value seq59402 109 1e-19 >seq59402 Length=222 Score = 109 bits (120), Expect = 1e-19 Identities = 141/188 (75%), Gaps = 5/188 (3%) Strand=Plus/Plus Query 6209 GCTAGGGCGCGCTCGTAGGGATTGAGTGGGAAGCCCCACGGCATGGGATGGGTAAGTGCA 6268 || || ||||||||||| || ||||||||| | ||||| |||||||| ||| | || || Sbjct 3 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGA-CCCCATGGCATGGGGTGG-TGAGCGCG 60 Query 6269 GAGGCGTACATGCCACAGATGTCATAAACGTAAAGTGGTTCGCGTAGCACCCCAATGTAA 6328 |||||||||||||| || ||||| |||||||| || || || | || | |||| || Sbjct 61 GAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGATAT 120 Query 6329 GTTGGATAACAGCGTCCTCCGCGAATGCTAGCCCGAACATAGTCATACATTTCGTGGGAA 6388 || || || || | ||| |||| ||||| || || || || || || | |||||| || Sbjct 121 GTAGG-TAGCATC-TCC-ACGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCGAG 177 Query 6389 GGGGCCAG 6396 || || || Sbjct 178 GGAGCGAG 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109285041060096