Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq13764 84.2 3e-11 seq1322 84.2 3e-11 >seq13764 Length=21010 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 145670 TCAGCTGGAGCTTCAGGGGC-TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACG 145728 ||| ||| | ||||| | || || | ||| || |||||||||||| || || | | Sbjct 7050 TCACCTGTA-CTTCAAGAGCATCGATGTGATTTTTGTAGACGTGCGCATCGCCGATAGTG 6992 Query 145729 TGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAG 145788 || | ||||| |||||| ||| | |||| ||| || | |||||||||||| | |||| Sbjct 6991 TGTACAAAGTCACCGGGCGTTAGGTCAGTGATGTGCGCAATCATGTAGGTCAGTAAGGAG 6932 Query 145789 TAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 ||||| || |||||||| || || || || ||| Sbjct 6931 TAGCTTGCAATGTTGAACGGAACGCCTAGACCC 6899 >seq1322 Length=160377 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 145680 CTTCAGGGGC-TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGT 145738 ||||| | || || | ||| || |||||||||||| || || | ||| | |||| Sbjct 133394 CTTCAAGAGCATCGATGTGATTTTTGTAGACGTGCGCATCGCCGATAGTGTGTACAAAGT 133335 Query 145739 CCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTA 145798 | |||||| ||| | |||| ||| || | ||||||||||| | ||||||||| || | Sbjct 133334 CACCGGGCGTTAGGTCAGTGATGTGCGCAATCATGTAGGTCAATAAGGAGTAGCTTGCAA 133275 Query 145799 TGTTGAAGGGCACCCCCAGCCCC 145821 ||||||| || || ||||| ||| Sbjct 133274 TGTTGAATGGAACGCCCAGACCC 133252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589632892599320