Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4379 107 2e-18 seq3742 102 6e-17 seq4762 89.7 4e-13 seq9089 86.0 5e-12 >seq4379 Length=69586 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 39081 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 39140 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| |||| ||||| ||||| || || | ||||| ||||| Sbjct 39141 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 39200 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||| ||||| | || || |||||| Sbjct 39201 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTG 39260 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| || ||||| ||||| Sbjct 39261 CCTGTCAGGGTCTTGACGAAGATCTGCAT 39289 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 40093 ACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 40152 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| |||| ||||| ||||| || || | ||||| ||||| Sbjct 40153 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 40212 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | | | |||| | ||| ||||| | || || |||||| Sbjct 40213 ATCTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGAGTGATGGTCTTG 40272 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| ||||| || ||||| ||||| ||| Sbjct 40273 CCTGTCAGGGTCTTGACGAAGATCTGCATCTTG 40305 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 49716 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 49775 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| |||| ||||| ||||| || || | ||||| ||||| Sbjct 49776 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 49835 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | | | |||| | ||| ||||| | || || |||||| Sbjct 49836 ATCTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTG 49895 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| ||||| || ||||| ||||| ||| Sbjct 49896 CCTGTCAGGGTCTTGACGAAGATCTGCATCTTG 49928 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||| ||||| ||||||||||| ||| ||| | || ||||| || ||||||||||| Sbjct 39654 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 39713 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| ||||| || || | ||||| ||||| || || || || Sbjct 39714 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCTTTGACATT 39773 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | |||| | ||| ||||| | ||||| ||||| |||||||| ||||| || Sbjct 39774 CTCGATGGTGTCACTTGGCTCGACCTCAAGAGTAATGGTCTTACCCGTCAGGGTCTTGAC 39833 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 39834 GAAGATCTGCAT 39845 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 39865 ACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 39924 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||| || |||| |||| ||||| || || | ||||| ||||| Sbjct 39925 AGCTGCATTACGGCAAAAATCAGATGCTGCTGGTCTGGTGGGATGCCCTCGTTGTCTTGG 39984 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | |||||| ||||| Sbjct 39985 ATCTTGGCCTTGACATTCTTGATGGTGTCACTTGGCTCGACCTCAAGGGTAATGGTCTTA 40044 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||| ||||| || ||||||||||| Sbjct 40045 CCCGTCAAGGTCTTGACGAAGATTTGCAT 40073 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 39451 ACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 39510 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || || ||||||||||| |||| ||||| ||||| || || | ||||| ||||| Sbjct 39511 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTC 39566 >seq3742 Length=77992 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 33228 ACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 33169 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| |||| ||||| ||||| || || | ||||| ||||| Sbjct 33168 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 33109 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | |||| | ||| ||||| | || || ||||| Sbjct 33108 ATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTA 33049 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| || ||||| ||||| Sbjct 33048 CCTGTCAGGGTCTTGACGAAGATCTGCAT 33020 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 33000 ACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 32941 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || |||||||| || |||| ||||| ||||| || || | ||||| ||||| Sbjct 32940 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 32881 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | | | |||| | ||| ||||| | || || |||||| Sbjct 32880 ATCTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGAGTGATGGTCTTG 32821 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| ||||| || ||||| ||||| ||| Sbjct 32820 CCTGTCAGGGTCTTGACGAAGATCTGCATCTTG 32788 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 33456 ACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 33397 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| |||| ||||| ||||| || || | ||||| ||||| Sbjct 33396 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 33337 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||| ||||| | ||| || || ||| Sbjct 33336 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTG 33277 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| || ||||| ||||| Sbjct 33276 CCTGTCAAGGTCTTGACGAAGATCTGCAT 33248 >seq4762 Length=92317 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| |||||| ||||||||| |||||||||||| || ||| |||| ||| Sbjct 80945 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCC 80886 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || |||||||| |||| || ||| ||||| || || | || ||||||||| Sbjct 80885 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGCGGGATGCCTTCCTTGTCC 80829 >seq9089 Length=72386 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| |||||| ||||||||| |||||||||||| || ||| |||| ||| Sbjct 52150 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCC 52091 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||| || |||| || ||| ||||| || || | || ||||||||| Sbjct 52090 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGCGGGATGCCTTCCTTGTCC 52034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394785420118843