Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_003266.2 Length=35994 Score E Sequences producing significant alignments: (Bits) Value seq59402 183 7e-42 >seq59402 Length=222 Score = 183 bits (202), Expect = 7e-42 Identities = 169/209 (81%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 6493 CGGCCAGCGCGCGCTCGTAGGGACTAAGGGGCGTGCCCCAGGGCATGGGGTGGGTGAGCG 6552 |||| |||||||||||||| || | || || | ||||| |||||||||||| |||||| Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGA-CCCCATGGCATGGGGTGG-TGAGCG 58 Query 6553 CGGAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGGCTCATCAAGGATGCCAATGT 6612 ||||||||||||||||||| |||||||| |||||||||||||| || || |||| | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6613 AGGTGGGGTAGCAGCGGCCCCCGCGGATGCTGGCGCGCACGTAGTCATACAACTCGTGCG 6672 | || ||||||| | || |||||||||||||||||||||| || || | ||||||| Sbjct 119 ATGT-AGGTAGCATC--TCCACGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6673 AGGGGGCGAGGAGCCCGGCTCCGAGATTG 6701 |||| |||||||| ||| ||||| ||| Sbjct 176 AGGGAGCGAGGAGGTCGGGACCGAGGTTG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114976970281976