Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8469 116 5e-21 >seq8469 Length=53876 Score = 116 bits (128), Expect = 5e-21 Identities = 202/294 (69%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 36428 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 36487 || || |||||||| | || ||||| || || |||||||| || ||||| || || || Sbjct 18798 TAGGTGTCAATCAACAAGCTGTACATCTCGGAGTGAATGTTCTCGATGGCGATCTGGAAC 18857 Query 36488 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 36547 |||||||| || | ||||||| | ||| || || | || || || | | || Sbjct 18858 CCGTAGAAGCACCGCGCCTCGGGCACCTGAACCTCCTGGCTGAACCGCTCCACGAGGTTC 18917 Query 36548 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 36607 || ||||| || ||||| ||||| || || |||||||| || || || || | | Sbjct 18918 TCGTTCACGATGCCGTCGCTGGCGGCGAAGAACGCCAAGACGTGGGAGATGAAGTGCCTC 18977 Query 36608 TCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACT 36667 |||| || | || | ||| || || || || || | || || || || || Sbjct 18978 TCGTCCGGCTTGAGGGACTCCCAGTCTGGGAGGTCCTTGGAGAGGTCGACCTCCTCGACC 19037 Query 36668 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 36721 ||||| || || ||||||||||| || ||||| | ||||||||| ||| ||||| Sbjct 19038 GTCCAGAACGACGCCTCTGCCTTCTTGTACATGTCCCAGATGTCCTGAAATTGA 19091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657677664829720