Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_006144.1 Length=34246 Score E Sequences producing significant alignments: (Bits) Value seq59402 149 1e-31 >seq59402 Length=222 Score = 149 bits (164), Expect = 1e-31 Identities = 161/207 (78%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 6491 CGCCAAG-GCGCGCTCGTAGGGACTGAGGGGGGCGCCCCAGGGCATGGGATGCGTCAGGG 6549 || |||| ||||||||||| || |||| |||| ||||| |||||||| || || || | Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGA-CCCCATGGCATGGGGTG-GTGAGCG 58 Query 6550 CCGAGGCGTACATGCCGCAGATGTCGTAGACGTAAAGGGGCTCCTCCAGGACGCCGAGGT 6609 | ||||||||||||||||| |||||||| ||||| |||||||| || | || || | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6610 AGGTTGGGTAGCAGCGCCCCCCGCGGATGCTGGCCCGTACGTAGTCGTAGAGCTCGTGCG 6669 | || || ||||| | || | |||||||||||| || ||||| ||||| || ||||||| Sbjct 119 ATGTAGG-TAGCATCTCCAC--GCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6670 AGGGGGCCAGAAGGTGGCGGCTGAGGT 6696 |||| || || |||| | | | ||||| Sbjct 176 AGGGAGCGAGGAGGTCGGGACCGAGGT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109387367877568