Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_006879.1 Length=34450 Score E Sequences producing significant alignments: (Bits) Value seq59402 129 1e-25 >seq59402 Length=222 Score = 129 bits (142), Expect = 1e-25 Identities = 139/179 (78%), Gaps = 5/179 (3%) Strand=Plus/Plus Query 6170 TCGTAGGGATTCAGGGGCGGTCCCCAGGGCATGGGGTGGGTCAGGGCCGAGGCGTACATG 6229 ||||| || || || || || ||||| |||||||||||| | || || |||||||||||| Sbjct 15 TCGTATGGGTTGAGTGG-GGACCCCATGGCATGGGGTGG-TGAGCGCGGAGGCGTACATG 72 Query 6230 CCGCAGATGTCGTACACGTACAGGGGCTCCCTCAACACCCCGATGTAAGTGGGGTAACAG 6289 ||||| |||||||| ||||| |||||||| || | | || | || || |||| || Sbjct 73 CCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGATATGT-AGGTAGCA- 130 Query 6290 CGCCCCCCGCGGATGCTGGCTCGCACGTAGTCGTACATCTCGTGAGAGGGAGCCATGAG 6348 | || ||||||||||||| |||||||| ||||| | ||||| |||||||| | ||| Sbjct 131 -TCTCCACGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCGAGGGAGCGAGGAG 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110039701338952