Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq503 95.1 1e-14 >seq503 Length=134583 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 ||||| | || || | ||||||||||| || || || ||||| || || | ||||| Sbjct 10721 TCATCGCGGCTAATCAGCTCATTAGAAAACGTCAAGCCAGGCATCAACCCACGTTTTTTC 10780 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619 | |||||| || || || || | ||| || |||||||| ||||| || || ||||| || Sbjct 10781 AGCCAAAAGATGGAGGCGAAAGATCCCGAGAAGAAAATCCCCTCCACCGCGGCAAAGGCC 10840 Query 21620 ACTAATCGTTCACCGTATGTAGATTCTTTATCCAAT--ATCCATTTTTCTGCCCATTTTG 21677 || | || |||||||| || || | || | ||| ||||| ||| ||||| | | Sbjct 10841 ACGACTCTCTCACCGTAGGTGGA--CGTTTCCGAATTAATCCAGTTTAGCGCCCAGTCAG 10898 Query 21678 CCTTTTCTTT 21687 |||||| ||| Sbjct 10899 CCTTTTGTTT 10908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531500657676920