Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_012959.1 Length=34920 Score E Sequences producing significant alignments: (Bits) Value seq59402 156 9e-34 >seq59402 Length=222 Score = 156 bits (172), Expect = 9e-34 Identities = 173/226 (77%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 6468 CGGCCAGGGCTCGCTCGCAGGGGTTCAGGGGCGGACCCCAGGGCATGGGATGCGTAAGCG 6527 |||| || || |||||| | ||||| || || |||||||| |||||||| || || |||| Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGG-GGACCCCATGGCATGGGGTG-GTGAGCG 58 Query 6528 CGGAGGCGTACATGCCGCAGATGTCATACACATAGATGGGCTCCGAGAGGATGCCGATGT 6587 ||||||||||||||||||| ||||| || || |||| |||||| ||| || || | | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6588 AGGTGGGATAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTCATACAACTCATGCG 6647 | || || || || | || | ||||||||||||||||||||| || || | || |||| Sbjct 119 ATGTAGG-TAGCATCTCCAC--GCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6648 AGGGTGCCAAGAAGGCGGGGCCAAGATTGGTGCGCTGGGGCTGCTC 6693 |||| || | || | |||| || || ||| | || ||||||||| Sbjct 176 AGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111542626470572