Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4379 116 4e-21 seq3742 116 4e-21 seq4762 111 2e-19 seq9089 105 8e-18 seq1253 84.2 2e-11 >seq4379 Length=69586 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||||| |||||||| Sbjct 39098 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 39157 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||| ||||| |||||| ||||| | Sbjct 39158 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATT 39217 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || | || || || | |||||||| ||||| ||||| || || || Sbjct 39218 CTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTGCCTGTCAGGGTCTTGAC 39277 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 39278 GAAGATCTGCAT 39289 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||||| |||||||| Sbjct 40110 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 40169 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||| ||||| |||||| |||| | Sbjct 40170 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCTTTGACATT 40229 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || | || || || | |||||||| ||||| ||||| || || || Sbjct 40230 CTCGATGGTGTCACTGGGCTCGACCTCGAGAGTGATGGTCTTGCCTGTCAGGGTCTTGAC 40289 Query 46582 AAAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 40290 GAAGATCTGCATCTTG 40305 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||||| || ||||| Sbjct 49733 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAA 49792 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||| ||||| |||||| |||| | Sbjct 49793 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCTTTGACATT 49852 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || | || || || | |||||||| ||||| ||||| || || || Sbjct 49853 CTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTGCCTGTCAGGGTCTTGAC 49912 Query 46582 AAAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 49913 GAAGATCTGCATCTTG 49928 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||||| |||||||| Sbjct 39654 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 39713 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||| ||||| |||||| |||| | Sbjct 39714 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCTTTGACATT 39773 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || | || || || | || ||||| || |||||||| || || || Sbjct 39774 CTCGATGGTGTCACTTGGCTCGACCTCAAGAGTAATGGTCTTACCCGTCAGGGTCTTGAC 39833 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 39834 GAAGATCTGCAT 39845 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||| | |||| || Sbjct 39882 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCATTACGGCAAA 39941 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||| | || | || ||| ||||| |||||| ||||| | Sbjct 39942 AATCAGATGCTGCTGGTCTGGTGGGATGCCCTCGTTGTCTTGGATCTTGGCCTTGACATT 40001 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || | || || || | || ||||| || ||||||| || || || Sbjct 40002 CTTGATGGTGTCACTTGGCTCGACCTCAAGGGTAATGGTCTTACCCGTCAAGGTCTTGAC 40061 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 40062 GAAGATTTGCAT 40073 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||||| |||||||| Sbjct 39468 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 39527 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 |||| ||||||||||| | || | || ||| ||||| |||||| ||||| Sbjct 39528 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGA 39583 >seq3742 Length=77992 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||||| |||||||| Sbjct 33439 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 33380 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||| ||||| |||||| ||||| | Sbjct 33379 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATT 33320 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || | || || || | |||||||||||||| |||| || || || Sbjct 33319 CTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCTGTCAAGGTCTTGAC 33260 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 33259 GAAGATCTGCAT 33248 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||||| ||||| || Sbjct 32983 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAA 32924 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||| ||||| |||||| |||| | Sbjct 32923 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCTTTGACATT 32864 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || | || || || | |||||||| ||||| ||||| || || || Sbjct 32863 CTCGATGGTGTCACTGGGCTCGACCTCGAGAGTGATGGTCTTGCCTGTCAGGGTCTTGAC 32804 Query 46582 AAAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 32803 GAAGATCTGCATCTTG 32788 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || || ||||| | || || |||||||| |||||||| Sbjct 33211 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 33152 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||| ||||| ||| || |||| | Sbjct 33151 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATT 33092 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || | || || || | |||||||| || || ||||| || || || Sbjct 33091 CTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTACCTGTCAGGGTCTTGAC 33032 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 33031 GAAGATCTGCAT 33020 >seq4762 Length=92317 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || |||||| || | || |||||| ||||| ||||||||||| || ||||| |||| Sbjct 80949 CAGCACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 80890 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || ||||||||||||||||| |||| | ||||||||| | ||| | || |||||||| Sbjct 80889 CTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGCGGGATGCCTTCCTTGTC 80830 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCT 46536 | |||||| ||||| || | | |||||||| Sbjct 80829 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCT 80794 >seq9089 Length=72386 Score = 105 bits (116), Expect = 8e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || |||||| || | || |||||| ||||| ||||||||||| || ||||| |||| Sbjct 52154 CAGCACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 52095 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || |||||||||||||| || |||| | ||||||||| | ||| | || |||||||| Sbjct 52094 CTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGCGGGATGCCTTCCTTGTC 52035 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCT 46536 | |||||| ||||| || | | |||||||| Sbjct 52034 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCT 51999 >seq1253 Length=217781 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 46406 TTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 46465 |||||||| |||||||| || || |||||| | || ||||||||||||||||| || ||| Sbjct 146622 TTTTGGATGTTGTAGTCTGACAGTGTGCGCCCATCCTCGAGCTGCTTGCCGGCAAAGATC 146681 Query 46466 AAGCGCTGCTGGTC 46479 || | ||||||||| Sbjct 146682 AACCTCTGCTGGTC 146695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564813178217160