Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8469 215 5e-51 seq937 210 2e-49 seq503 167 2e-36 seq4379 127 2e-24 seq3742 122 9e-23 seq4762 109 5e-19 seq9089 104 2e-17 seq2645 89.7 5e-13 >seq8469 Length=53876 Score = 215 bits (238), Expect = 5e-51 Identities = 211/272 (78%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248 ||||| || ||||| | |||||| |||||||| || || ||||| ||||||||||||||| Sbjct 18819 TACATCTCGGAGTGAATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCACCGCGCCTCG 18878 Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308 |||||| || || || ||| ||||| || || || ||||| ||||||||||||||| Sbjct 18879 GGCACCTGAACCTCCTGGCTGAACCGCTCCACGAGGTTCTCGTTCACGATGCCGTCGCTG 18938 Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368 |||||||| || |||| ||||| |||||| || | ||||| || | | |||| Sbjct 18939 GCGGCGAAGAACGCCAAGACGTGGGAGATGAAGTGCCTCTCGTCCGGCTTGAGGGACTCC 18998 Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428 ||||| | ||||||||| ||||| ||||||||||| ||||| ||||||||||| || Sbjct 18999 CAGTCTGGGAGGTCCTTGGAGAGGTCGACCTCCTCGACCGTCCAGAACGACGCCTCTGCC 19058 Query 133429 TTTTTGTACATACTCCACATGTCCGAATATTG 133460 || |||||||| ||| |||||| | |||| Sbjct 19059 TTCTTGTACATGTCCCAGATGTCCTGAAATTG 19090 >seq937 Length=97168 Score = 210 bits (232), Expect = 2e-49 Identities = 205/264 (78%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248 ||||| || ||||| | |||||| |||||||| || || ||||| |||||||||||||| Sbjct 94025 TACATCTCTGAGTGAATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCACCGCGCCTCC 94084 Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308 |||||| || || || ||| ||||| || || || ||||| ||||||||||||||| Sbjct 94085 GGCACCTGAACCTCCTGGCTGAACCGCTCCACGAGGTTCTCGTTCACGATGCCGTCGCTG 94144 Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368 |||||||| ||||||| ||||| |||||| || | ||| | || | | |||| Sbjct 94145 GCGGCGAAGAAGGCCAAGACGTGGGAGATGAAGTGCCTCTCATCCGGCTTGAGGGACTCC 94204 Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428 ||||| | ||||||||| ||||| ||||||||||| ||||| ||||||||||| || Sbjct 94205 CAGTCTGGGAGGTCCTTGGAGAGGTCGACCTCCTCGACCGTCCAGAACGACGCCTCTGCC 94264 Query 133429 TTTTTGTACATACTCCACATGTCC 133452 || |||||||| ||| |||||| Sbjct 94265 TTCTTGTACATGTCCCAGATGTCC 94288 >seq503 Length=134583 Score = 167 bits (184), Expect = 2e-36 Identities = 236/328 (72%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 133148 TCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGT 133207 ||||||||| | | | |||||||||||| | |||||||||||||| | || Sbjct 11083 TCTCTTCCGGGTCTCTGATGTAGGTGTCGATCAACAAGCTGTACATTTCCGAGTGAATGT 11142 Query 133208 TCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAG 133267 ||||||||| || ||||| ||||||||||| |||||||| | ||||| || ||||||| Sbjct 11143 TCTCCATGGTGAACTGAAACCCGTAAAAGCATCGCGCCTCAAGTACCTGAACCTCTTGAG 11202 Query 133268 CGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCA 133327 ||||||| | || |||||||| || |||||||||||||| ||||| || |||| | Sbjct 11203 TAAAACGCTGAAGGAGGTTTTCGTTTACAATGCCGTCGCTGGCCGCGAAGAAAGCCAAAA 11262 Query 133328 CGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGCGTGTCCTTG 133386 |||| |||||| | | ||| | || | || | ||||||| | |||||| Sbjct 11263 CGTGAGAGATGAATTTTCTCTC-CTCCCGCTTGAGAGATTCCCAGTGTGGTAGGTCCTTC 11321 Query 133387 GACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCAC 133446 || || || || || ||||| ||||| || || || | ||||| |||||||| ||| Sbjct 11322 GAGAGATCAACTTCTTCGACCGTCCAGAATGAAGCTTTTGCTTTCTTGTACATTAACCAA 11381 Query 133447 ATGTCCGAATATTGTATGGGA--AAAAT 133472 || ||| | ||| | |||| ||||| Sbjct 11382 ATATCCTACAATTAAAAGGGAGGAAAAT 11409 >seq4379 Length=69586 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || || ||||| |||||||| |||| |||||| || Sbjct 40304 AAGATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACCATCACTCTCGAGGTCGAGCCC 40245 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | |||| || |||| ||||||||||| || || | ||| Sbjct 40244 AGTGACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGCATCCCACCAGAC 40185 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| || || |||||||| || | |||||||| |||||| Sbjct 40184 CAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTAC 40125 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || || | || || || ||||| || ||| || | || || Sbjct 40124 AACATCCAGAAAGAGTCCACACTCCACTTGGTTCTCCGTCTGCGTGGTGG 40075 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || || ||||| |||||||| | || |||||| || Sbjct 49927 AAGATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACCATCACTCTTGAGGTCGAGCCC 49868 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | |||| || |||| ||||||||||| || || | ||| Sbjct 49867 AGTGACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGCATCCCACCAGAC 49808 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| || || |||||||| || | |||||||| |||||| Sbjct 49807 CAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTAC 49748 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || || | || || || ||||| || ||| || | || || Sbjct 49747 AACATCCAGAAAGAGTCCACCCTCCACTTGGTTCTCCGTCTGCGTGGTGG 49698 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| |||||||| | || |||||| ||| Sbjct 39289 ATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACCATCACTCTTGAGGTCGAGCCCAGT 39230 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||||||||| || || | ||||| Sbjct 39229 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCAGACCAG 39170 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| || | |||||||| ||||||||| Sbjct 39169 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 39110 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || || || ||||| || ||| || | || || Sbjct 39109 ATCCAGAAAGAGTCCACCCTCCACTTGGTTCTCCGTCTGCGTGGAGG 39063 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || ||||| || | || |||||| | | Sbjct 39845 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACCATTACTCTTGAGGTCGAGCCAAGT 39786 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| || |||| ||||||||||| || || | ||||| Sbjct 39785 GACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGCATCCCACCAGACCAG 39726 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| || | |||||||| ||||||||| Sbjct 39725 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 39666 Query 38424 ATCCAAAAGGA 38434 ||||| || || Sbjct 39665 ATCCAGAAAGA 39655 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | ||||| || ||||| ||| | || |||||| | | Sbjct 40073 ATGCAAATCTTCGTCAAGACCTTGACGGGTAAGACCATTACCCTTGAGGTCGAGCCAAGT 40014 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || || | ||||| Sbjct 40013 GACACCATCAAGAATGTCAAGGCCAAGATCCAAGACAACGAGGGCATCCCACCAGACCAG 39954 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 |||| || |||| || | | |||||||| || | |||||||| ||||||||| Sbjct 39953 CAGCATCTGATTTTTGCCGTAATGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 39894 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || || || ||||| || ||| || | || || Sbjct 39893 ATCCAGAAAGAGTCCACACTCCACTTGGTTCTCCGTCTGCGTGGTGG 39847 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||||||||| || || | ||||| ||||| || || | ||| || || Sbjct 39575 AAGATCCAAGACAAAGAGGGCATCCCACCAGACCAGCAGCGTCTGATCTTCGCCGGAAAG 39516 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 |||||||| || | |||||||| |||||||||||||| || || | || || || Sbjct 39515 CAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACATCCAGAAAGAGTCCACACTCCAC 39456 Query 38448 TTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| || | || || Sbjct 39455 TTGGTTCTCCGTCTGCGTGGTGG 39433 >seq3742 Length=77992 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || || ||||| |||||||| |||| |||||| || Sbjct 32789 AAGATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACCATCACTCTCGAGGTCGAGCCC 32848 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | |||| || |||| ||||||||||| || || | ||| Sbjct 32849 AGTGACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGCATCCCACCAGAC 32908 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | || || || |||||||| || | |||||||| |||||| Sbjct 32909 CAGCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTAC 32968 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || || | || || || ||||| || ||| || | || || Sbjct 32969 AACATCCAGAAAGAGTCCACACTCCACTTGGTTCTCCGTCTGCGTGGTGG 33018 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || |||||||| | || |||||| ||| Sbjct 33020 ATGCAGATCTTCGTCAAGACCCTGACAGGTAAGACCATCACTCTTGAGGTCGAGCCCAGT 33079 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||||| ||||||||||| || || | ||||| Sbjct 33080 GACACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCACCAGACCAG 33139 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| || | |||||||| ||||||||| Sbjct 33140 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 33199 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || || || ||||| || ||| || | || || Sbjct 33200 ATCCAGAAAGAGTCCACACTCCACTTGGTTCTCCGTCTGCGTGGTGG 33246 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||||||||||||| | || |||||| ||| Sbjct 33248 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAAACCATCACCCTTGAGGTCGAGCCCAGT 33307 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||||||||| || || | ||||| Sbjct 33308 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCAGACCAG 33367 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| || | |||||||| ||||||||| Sbjct 33368 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 33427 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || || || |||| || ||| || | || || Sbjct 33428 ATCCAGAAAGAGTCCACCCTCCACCTGGTTCTCCGTCTGCGTGGAGG 33474 >seq4762 Length=92317 Score = 109 bits (120), Expect = 5e-19 Identities = 112/144 (78%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAA 38386 || |||| ||||| || || || |||||| ||||| ||| |||| || | ||| ||||| Sbjct 80821 AAGATCCAGGACAAGGAAGGCAT-CCCGCCAGACCAGCAGAGGCTGATCTTCGCCGGCAA 80879 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||||||| |||| ||||||||| ||||||||||||||| ||||| | ||||| || Sbjct 80880 GCAGCTGGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACGCTCCA 80939 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| | || | ||||| Sbjct 80940 CCTGGTGCTGAGGCTGCGGGGCGG 80963 >seq9089 Length=72386 Score = 104 bits (114), Expect = 2e-17 Identities = 111/144 (77%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAA 38386 || |||| ||||| || || || |||||| ||||| ||| |||| || | || ||||| Sbjct 52026 AAGATCCAGGACAAGGAAGGCAT-CCCGCCAGACCAGCAGAGGCTGATCTTTGCCGGCAA 52084 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||||||| |||| ||||||||| ||||||||||||||| ||||| | ||||| || Sbjct 52085 GCAGCTGGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACGCTCCA 52144 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| | || | ||||| Sbjct 52145 CCTGGTGCTGAGGCTGCGGGGCGG 52168 >seq2645 Length=46952 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 133209 CTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC 133268 |||||| || ||||| ||||| || || || | ||||| | ||| || |||||| | Sbjct 12863 CTCCATAGCCATTTGGAAGCCATAGAAACATCTTGCCTCAGGAATCTGAACCTCTTGACC 12804 Query 133269 GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCAC 133328 || | ||| || || || || ||||| || || ||||| || || || |||||||| | Sbjct 12803 AAACCTCTCCACTAGGTTCTCATTGACAATACCATCGCTTGCTGCAAAGAAGGCCAGGAT 12744 Query 133329 GTGCTTGATGAAAT 133342 |||||||||||||| Sbjct 12743 GTGCTTGATGAAAT 12730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499796526254720