Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq49 152 2e-31 >seq49 Length=210639 Score = 152 bits (168), Expect = 2e-31 Identities = 346/517 (67%), Gaps = 5/517 (1%) Strand=Plus/Plus Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 |||||| | | ||||||||||||| | ||||||||| || |||||||| | || ||| Sbjct 23369 AACACAATCTTTGATGCTAAACGTCTGATTGGCCGTCGGTTTGATGATGCATCGGTCCAA 23428 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210 ||| | ||| || | | | || | || || |||| | |||| | ||| Sbjct 23429 GCAGATATGAAACACTGGCCCTTCAAGGTGATCAACAAACAAGGGATGCCCATGCTGCAA 23488 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 | | || | ||| |||| || || |||| ||||| || || ||||| || Sbjct 23489 GCCGAGTACATGAATGAGGCTAAGACCTTCCCTCCAGAAGAGATCAGCTCCATGGTGCTG 23548 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 ||| ||||| || ||||| || |||| |||| | ||||| ||||| || || Sbjct 23549 GTTAAGATGAAGGAGACAGCCGAGGCATATCTTGGGCATAAGGTTACAGATGCTGTCATC 23608 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| || || || ||||||||| | || | ||||| || |||||||| ||| ||| Sbjct 23609 ACTGTACCAGCATACTTCAATGATTCCCAGAGACAAGCTACCAAAGATGCCGGAGTGATT 23668 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||| | |||||||| | || || |||||||| ||||| || || | || || ||| Sbjct 23669 GCTGGTCTCAATGTTCTCAGGATCATCAATGAACCCACAGCTGCCGCCTTGGCCTACGGA 23728 Query 451451 CTAGGAAAATCAAAAGAAACA-GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 || ||| || |||| || | || || || || | | |||||| | || || || Sbjct 23729 CT-GGACAA---AAAGCTGCAAGGGGAGAAGCATGTTCTGATTTTTGATCTAGGAGGTGG 23784 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569 || |||| ||||| || | ||||| ||||| | ||||| || | || Sbjct 23785 CACCTTTGATGTGTCTGTCCTGGCTATTGAGGATGGCATGTTTGAGGTTCTCTCCACGGC 23844 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 || ||||||||||| || ||||| || |||| ||| Sbjct 23845 CGGCGATACTCATCTTGGTGGTGAGGACTTTGACAAT 23881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974194934037764