Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq25666 86.0 7e-12 seq5550 86.0 7e-12 >seq25666 Length=25764 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 153893 AGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAG 153952 ||| ||||| |||| |||||||| |||||||||| || ||||| ||||||||||| || Sbjct 18233 AGCTTACAGGCTAGCGCTACAGACCCGAGAGCAGCACATTAGGAGGGACAAAGCAACAAG 18174 Query 153953 TAACATCTGCACAGCTCAGG 153972 |||||| ||||| || |||| Sbjct 18173 TAACATATGCACTGCACAGG 18154 >seq5550 Length=52509 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 153893 AGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAG 153952 ||| ||||| |||| |||||||| |||| ||||| |||||||| ||||||||||| || Sbjct 3070 AGCCTACAGGCTAGCGCTACAGACCCGAGAACAGCACATCAGGAGGGACAAAGCAACAAG 3129 Query 153953 TAACATCTGCACAGCTCAGG 153972 |||||| ||||| || |||| Sbjct 3130 TAACATATGCACTGCACAGG 3149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578777065450720