Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq25666 82.4 9e-11 seq5550 82.4 9e-11 >seq25666 Length=25764 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 158568 AGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAG 158627 ||| ||||| |||| |||||||| |||||||||| || || || ||||||||||| || Sbjct 18233 AGCTTACAGGCTAGCGCTACAGACCCGAGAGCAGCACATTAGGAGGGACAAAGCAACAAG 18174 Query 158628 TAACATCTGCACAGCACA 158645 |||||| ||||| ||||| Sbjct 18173 TAACATATGCACTGCACA 18156 >seq5550 Length=52509 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 158568 AGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAG 158627 ||| ||||| |||| |||||||| |||| ||||| ||||| || ||||||||||| || Sbjct 3070 AGCCTACAGGCTAGCGCTACAGACCCGAGAACAGCACATCAGGAGGGACAAAGCAACAAG 3129 Query 158628 TAACATCTGCACAGCACA 158645 |||||| ||||| ||||| Sbjct 3130 TAACATATGCACTGCACA 3147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587608816432880