Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_017825.1 Length=36711 Score E Sequences producing significant alignments: (Bits) Value seq59402 194 4e-45 >seq59402 Length=222 Score = 194 bits (214), Expect = 4e-45 Identities = 179/222 (81%), Gaps = 5/222 (2%) Strand=Plus/Plus Query 6541 CGGCCAGCGCGCGCTCGTAGGGACTGAGGGGCGTGCCCCAGGGCATGGGGTGGGTGAGCG 6600 |||| |||||||||||||| || |||| || | ||||| |||||||||||| |||||| Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGA-CCCCATGGCATGGGGTGG-TGAGCG 58 Query 6601 CGGAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGGCTCCTCGAGGATGCCGATGT 6660 ||||||||||||||||||| |||||||| |||||||||||||| ||| || || | | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6661 AGGTGGGGTAGCAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTCATACAGCTCGTGCG 6720 | || ||||||| | || |||||||||||||||||||||| || || || ||||||| Sbjct 119 ATGT-AGGTAGCA--TCTCCACGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6721 AGGGCGCGAGGAGCCCCGGGCCCAGGTTGGTGCGACTGGGCT 6762 |||| |||||||| | || || |||||| | || ||||| Sbjct 176 AGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCT 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117269730535958