Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_020485.1 Length=34302 Score E Sequences producing significant alignments: (Bits) Value seq59402 134 3e-27 >seq59402 Length=222 Score = 134 bits (148), Expect = 3e-27 Identities = 159/208 (76%), Gaps = 7/208 (3%) Strand=Plus/Plus Query 6460 CGGCCAAAGCTCGTTCATATGGACTTAAGGGGGCACCCCATGGCATAGGATGGGTTAAAG 6519 |||| | || || || ||||| || || ||| |||||||||||| || ||| | | | Sbjct 1 CGGCAAGCGCGCGCTCGTATGGG-TTGAGTGGGGACCCCATGGCATGGGGTGG-TGAGCG 58 Query 6520 CTGAAGCGTACATGCCGCAAATGTCATAAACATAAATGGGCTC-CTGAAGTACTCCAATG 6578 | || |||||||||||||||||||| ||||| || | |||||| |||| ||| ||||| Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGA-GTATTCCAAGA 117 Query 6579 TAAGTTGGGTAACAGCGCCCTCCTCTGATGCTGGCGCGCACGTAGTCATAAAGCTCGTGT 6638 || || || || || | || | | |||||||||||||||||| || || || ||||| Sbjct 118 TATGTAGG-TAGCATCTCCA--CGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGC 174 Query 6639 GAGGGAGCCAGTAGGTGGCGACTGAGGT 6666 |||||||| || |||| | ||| ||||| Sbjct 175 GAGGGAGCGAGGAGGTCGGGACCGAGGT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109566439808144