Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_021168.1 Length=34391 Score E Sequences producing significant alignments: (Bits) Value seq59402 125 2e-24 >seq59402 Length=222 Score = 125 bits (138), Expect = 2e-24 Identities = 144/187 (77%), Gaps = 5/187 (3%) Strand=Plus/Plus Query 6138 CGGCCAGAGCCCTCTCGTACGGATTAAGGGGAGGACCCCAAGGCATGGGGTGGGTAAGGG 6197 |||| || || | |||||| || || || || |||||||| |||||||||||| | || | Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGG-GGACCCCATGGCATGGGGTGG-TGAGCG 58 Query 6198 CGGAAGCGTACATGCCACAAATGTCATAAACATAAAGAGGCTGGCGTAAAACGCCAATGT 6257 |||| ||||||||||| |||||||| ||||| || || |||| | | | |||| | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6258 ATGTAGGATAGCAACGTCCGCCGCGAATGCTGGCCCTGACGTAATCGTACATTTCATGGG 6317 ||||||| ||||| | ||| |||| |||||||| | ||||||||||| | ||| || | Sbjct 119 ATGTAGG-TAGCATC-TCC-ACGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6318 AGGGTGC 6324 |||| || Sbjct 176 AGGGAGC 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109851036269238