Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq47842 98.7 3e-15 seq6406 98.7 3e-15 >seq47842 Length=15337 Score = 98.7 bits (108), Expect = 3e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | ||||||| |||||||||| | |||||||||||| | |||| |||||| Sbjct 11517 GTACTCGATAATCTCAGTGCACAGGTTACTGCACTTGATGGTGCCAAGGTTCTGCTGGTT 11458 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | |||||||| || ||||| ||||| || ||||| ||||| || ||||| |||| || Sbjct 11457 ACTCTTACTGTTGCAGGCATCTTTGTACAGCATGTACGGGGTACCGGTCTCTGTCTGGGC 11398 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTC 155806 | || || ||||||| | | || || || | |||| |||| | ||||| Sbjct 11397 CTGCACGATGGCCTGCCAGAGATACTGAGCCTTGATCTTCTTGCGGTATTTCCCTTC 11341 >seq6406 Length=55272 Score = 98.7 bits (108), Expect = 3e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | |||||| |||||||||| || |||||||||||| | |||| |||||| Sbjct 30230 GTACTCGATAATCTCGGTGCACAGGTTACTACACTTGATGGTGCCAAGGTTCTGCTGGTT 30171 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | |||||||| || ||||| ||||| || ||||| ||||| || ||||| |||| || Sbjct 30170 ACTCTTACTGTTGCAGGCATCTTTGTACAGCATGTACGGGGTACCGGTCTCTGTCTGGGC 30111 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTC 155806 | || || ||||||| | | || || || | |||| |||| | ||||| Sbjct 30110 CTGCACGATGGCCTGCCAGAGATACTGAGCCTTGATCTTCTTGCGGTATTTCCCTTC 30054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470682689267671