Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq12408 84.2 4e-11 seq17 84.2 4e-11 >seq12408 Length=19875 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 2619 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 2677 Query 122832 GAC 122834 || Sbjct 2678 TAC 2680 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 8557 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 8615 Query 122832 GAC 122834 || Sbjct 8616 TAC 8618 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 13033 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 13091 Query 122832 GAC 122834 || Sbjct 13092 TAC 13094 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 14947 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 15005 Query 122832 GAC 122834 || Sbjct 15006 TAC 15008 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 19719 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 19777 Query 122832 GAC 122834 || Sbjct 19778 TAC 19780 >seq17 Length=363265 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 230114 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 230172 Query 122832 GAC 122834 || Sbjct 230173 TAC 230175 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 235408 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 235466 Query 122832 GAC 122834 || Sbjct 235467 TAC 235469 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 239553 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 239611 Query 122832 GAC 122834 || Sbjct 239612 TAC 239614 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 250432 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 250490 Query 122832 GAC 122834 || Sbjct 250491 TAC 250493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825295473115320