Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_022266.1 Length=31967 Score E Sequences producing significant alignments: (Bits) Value seq59402 187 5e-43 >seq59402 Length=222 Score = 187 bits (206), Expect = 5e-43 Identities = 170/208 (82%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 6688 GCCAGGGCGCGCTCGTAGGGGTTGAGGGGCGCCCCCCAGGGCATGGGATGGGTGAGGGCC 6747 || || ||||||||||| |||||||| || | |||| | |||||||| ||| |||| || Sbjct 3 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGACCCC-ATGGCATGGGGTGG-TGAGCGCG 60 Query 6748 GAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGGCTCGCGGAGCACGCCGAGGTAG 6807 ||||||||||||||||| |||||||| |||||||||||||| | ||| | || || || Sbjct 61 GAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGATAT 120 Query 6808 GTGGGATAGCAGCGTCCGCCGCGGATGCTGGCGCGCACGTAGTCGTACATCTCGTGCGAG 6867 || || ||||| | ||| | ||||||||||||||||||||| ||||| | ||||||||| Sbjct 121 GTAGG-TAGCATC-TCCAC-GCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCGAG 177 Query 6868 GGGGCGAGGAGGCCGCCTCCGAGGTCGC 6895 || ||||||||| || ||||||| || Sbjct 178 GGAGCGAGGAGGTCGGGACCGAGGTTGC 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102099779845734