Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3742 156 3e-33 seq4379 150 1e-31 seq4762 116 2e-21 >seq3742 Length=77992 Score = 156 bits (172), Expect = 3e-33 Identities = 164/214 (77%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 33231 AGAACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 33172 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||||||||||||||| || ||||||||| | || | ||||| ||||| Sbjct 33171 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCT 33112 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | ||| ||| |||||| |||| || |||| Sbjct 33111 TGGATTTTGGCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGG 33054 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 33053 TCTTACCTGTCAGGGTCTTGACGAAGATCTGCAT 33020 Score = 150 bits (166), Expect = 1e-31 Identities = 163/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 33459 AGAACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 33400 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||||||||||||||| || ||||||||| | || | ||||| ||||| Sbjct 33399 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCT 33340 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | ||| ||| |||||| |||| ||| |||| Sbjct 33339 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 33282 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || || | |||||| || ||||||||||| Sbjct 33281 TTTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 33248 Score = 141 bits (156), Expect = 6e-29 Identities = 161/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 33003 AGAACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 32944 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||| |||||||| || ||||||||| | || | ||||| ||||| Sbjct 32943 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCT 32884 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || |||||| || || || | ||| ||| |||||| || | || |||| Sbjct 32883 TGGATCTTGGCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCGAGAGTGATGG 32826 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 32825 TCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 32792 >seq4379 Length=69586 Score = 150 bits (166), Expect = 1e-31 Identities = 163/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 39078 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 39137 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||||||||||||||| || ||||||||| | || | ||||| ||||| Sbjct 39138 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCT 39197 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | ||| ||| |||||| |||| || |||| Sbjct 39198 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGG 39255 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 39256 TCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 39289 Score = 150 bits (166), Expect = 1e-31 Identities = 163/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 49713 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 49772 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| ||||||||||| || ||||||||| | || | ||||| ||||| Sbjct 49773 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCT 49832 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || |||||| || || || | ||| ||| |||||| |||| || |||| Sbjct 49833 TGGATCTTGGCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGG 49890 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 49891 TCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 49924 Score = 147 bits (162), Expect = 1e-30 Identities = 150/194 (77%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||| ||||| ||||| || ||| |||| |||| ||||| |||||||||||||| Sbjct 39654 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 39713 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || ||||||||| | || | ||||| ||||| | || || |||||| | Sbjct 39714 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCTTTGAC--A 39771 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | ||| | | |||||| |||| || |||||||| ||||| |||||||| Sbjct 39772 TTCTCGATGGTGTCACTTGGCTCGACCTCAAGAGTAATGGTCTTACCCGTCAGGGTCTTG 39831 Query 34964 ACAAAGATCTGCAT 34977 || ||||||||||| Sbjct 39832 ACGAAGATCTGCAT 39845 Score = 147 bits (162), Expect = 1e-30 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 40090 AGAACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 40149 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||||||||||||||| || ||||||||| | || | ||||| ||||| Sbjct 40150 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCT 40209 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || |||||| || || || | ||| ||| |||||| || | || |||| Sbjct 40210 TGGATCTTGGCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCGAGAGTGATGG 40267 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 40268 TCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 40301 Score = 114 bits (126), Expect = 8e-21 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||| ||| ||||| ||||| || ||| |||| |||| Sbjct 49485 AGAACCAACTGGAGGGTGAACTCTCTCTTGATGTTGTAGTCAGACAGGGTGCGGCCATCT 49544 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||| || |||| || ||||| | ||||||||| | || | ||||| ||||| Sbjct 49545 TCCAGCTGCATTACGGCAAAAATCAGATGCTGCTGGTCTGGTGGGATGCCCTCGTTGTCT 49604 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | ||| | | |||||| |||| ||| |||| Sbjct 49605 TGGATCTTGGCCTTGAC--ATTCTTGATGGTGTCACTTGGCTCGACCTCAAGGGTAATGG 49662 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| | |||||| || ||||||||||| Sbjct 49663 TCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 49696 Score = 102 bits (112), Expect = 5e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 39448 AGAACCAAGTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 39507 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| |||||||||||||||||||| || ||||||||| | || | ||||| ||||| Sbjct 39508 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTC 39566 >seq4762 Length=92317 Score = 116 bits (128), Expect = 2e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||| || |||||| |||||||| | ||| ||||||||| ||||| ||||| || Sbjct 80963 CCGCCCCGCAGCCTCAGCACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAG 80904 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| | || ||||| ||||| |||||||||||||| | ||||||||| |||| Sbjct 80903 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGCGGG 80844 Query 34871 ACCCCCTCCTTGTC 34884 | || |||||||| Sbjct 80843 ATGCCTTCCTTGTC 80830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325453910743277