Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq16816 89.7 7e-13 seq825 87.8 2e-12 seq45997 86.0 8e-12 seq22335 86.0 8e-12 seq11980 86.0 8e-12 seq9296 86.0 8e-12 seq206 86.0 8e-12 seq20149 82.4 1e-10 seq13280 82.4 1e-10 >seq16816 Length=20458 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 |||| |||||| |||||||||||||||||| | | ||||| | | |||||||||||||| Sbjct 17324 CTTAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTC 17383 Query 8713 GATTCCCCGACGAGGAG 8729 ||||||||| || |||| Sbjct 17384 GATTCCCCGCCGGGGAG 17400 >seq825 Length=84064 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 20403 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 20344 Query 8718 CCCGACGAGGAGCAGAGG 8735 |||| || |||| |||| Sbjct 20343 CCCGCCGGGGAGGCGAGG 20326 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 20714 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 20655 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 20654 CCCGCCGGGGAG 20643 >seq45997 Length=666 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 234 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 293 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 294 CCCGCCGGGGAG 305 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| |||||||||||| ||||| | | ||||| | | ||||||||||||||| Sbjct 230 CCAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 289 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 290 ATTCCCCGCCGGGGAGG 306 >seq22335 Length=663 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 18 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 77 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 78 CCCGCCGGGGAG 89 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 ||||||||| |||||||||||| ||||| | | ||||| | | |||||||||||||||| Sbjct 15 CAGTCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGA 74 Query 11786 TTCCCCGACGAGGAGG 11801 ||||||| || ||||| Sbjct 75 TTCCCCGCCGGGGAGG 90 >seq11980 Length=23343 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 7014 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 7073 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 7074 CCCGCCGGGGAG 7085 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 8651 GCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGT 8710 || ||| |||||| ||||||||| |||||||| | | ||||| | | |||||||||||| Sbjct 6851 GCATTAATCCTCGGTAGTATAGTAGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGT 6910 Query 8711 TCGATTCCCCGACGAGGAG 8729 ||||||||||| || |||| Sbjct 6911 TCGATTCCCCGCCGGGGAG 6929 >seq9296 Length=16109 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 58 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 117 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 118 CCCGCCGGGGAG 129 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 214 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 273 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 274 CCCGCCGGGGAG 285 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/87 (83%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| |||||||||||| ||||| | | ||||| | | ||||||||||||||| Sbjct 54 CCAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 113 Query 11785 ATTCCCCGACGAGGAGGGAGGTTAACG 11811 |||||||| || ||||| | |||||| Sbjct 114 ATTCCCCGCCGGGGAGGCA--TTAACG 138 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| |||||||||||| ||||| | | ||||| | | ||||||||||||||| Sbjct 210 CCAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 269 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 270 ATTCCCCGCCGGGGAGG 286 >seq206 Length=135359 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 68030 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 67971 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 67970 CCCGCCGGGGAG 67959 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 71544 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 71485 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 71484 CCCGCCGGGGAG 71473 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 71700 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 71641 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 71640 CCCGCCGGGGAG 71629 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 92020 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 91961 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 91960 CCCGCCGGGGAG 91949 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 93461 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 93402 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 93401 CCCGCCGGGGAG 93390 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 96481 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 96422 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 96421 CCCGCCGGGGAG 96410 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| |||||||||||| ||||| | | ||||| | | ||||||||||||||| Sbjct 68034 CCAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 67975 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 67974 ATTCCCCGCCGGGGAGG 67958 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| |||||||||||| ||||| | | ||||| | | ||||||||||||||| Sbjct 71548 CCAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 71489 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 71488 ATTCCCCGCCGGGGAGG 71472 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| |||||||||||| ||||| | | ||||| | | ||||||||||||||| Sbjct 71704 CCAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 71645 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 71644 ATTCCCCGCCGGGGAGG 71628 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| |||||||||||| ||||| | | ||||| | | ||||||||||||||| Sbjct 93465 CCAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 93406 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 93405 ATTCCCCGCCGGGGAGG 93389 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| |||||||||||| ||||| | | ||||| | | ||||||||||||||| Sbjct 96485 CCAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 96426 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 96425 ATTCCCCGCCGGGGAGG 96409 >seq20149 Length=5951 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 ||||| ||||| |||||||||||||||||| | | ||||| | | |||||||||||||| Sbjct 2262 CTTAT-CCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTC 2204 Query 8713 GATTCCCCGACGAGGAG 8729 ||||||||| | |||| Sbjct 2203 GATTCCCCGCTGGGGAG 2187 >seq13280 Length=16439 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| ||||||||||||| |||| | | ||||| | | ||||||||||||||| Sbjct 15621 CCAATCCTCGGTAGTATAGTGGTAAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCG 15562 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 15561 ATTCCCCGCCGGGGAGG 15545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652353673017520