Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq7039 95.1 4e-16 seq1748 95.1 4e-16 seq17261 91.5 5e-15 seq14148 87.8 6e-14 seq6498 87.8 6e-14 seq4059 87.8 6e-14 seq14576 86.0 2e-13 seq4395 84.2 7e-13 seq2629 78.8 3e-11 >seq7039 Length=36800 Score = 95.1 bits (104), Expect = 4e-16 Identities = 61/66 (92%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC--AA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 28606 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAA 28665 Query 2827 CCCCGG 2832 |||||| Sbjct 28666 CCCCGG 28671 >seq1748 Length=89899 Score = 95.1 bits (104), Expect = 4e-16 Identities = 61/66 (92%), Gaps = 2/66 (3%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC--AA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 70293 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAA 70234 Query 2827 CCCCGG 2832 |||||| Sbjct 70233 CCCCGG 70228 >seq17261 Length=15365 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| Sbjct 928 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAACCCCGGG 985 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| Sbjct 753 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCCCGGG 810 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||| Sbjct 68 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATTCCGGG 125 >seq14148 Length=22110 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| Sbjct 21900 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCCCGGG 21957 >seq6498 Length=38082 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| Sbjct 12758 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCCCGGG 12815 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| Sbjct 12938 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCCCGGG 12995 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| Sbjct 13189 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCCCGGG 13246 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| ||||||| |||||||| |||||| Sbjct 12585 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCTTGGTTCAATCCCGGG 12642 >seq4059 Length=57320 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| Sbjct 6940 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCCCGGG 6883 >seq14576 Length=16028 Score = 86.0 bits (94), Expect = 2e-13 Identities = 59/66 (89%), Gaps = 2/66 (3%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC--AA 2826 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||| || Sbjct 5653 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAAAA 5594 Query 2827 CCCCGG 2832 |||||| Sbjct 5593 CCCCGG 5588 >seq4395 Length=41209 Score = 84.2 bits (92), Expect = 7e-13 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA-- 2826 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 1946 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAAAA 2005 Query 2827 -CCCCGG 2832 |||||| Sbjct 2006 CCCCCGG 2012 >seq2629 Length=61490 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| | ||||||||||||| |||||| ||||||||| || ||| Sbjct 47576 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCTCTGGTTCAATCCTGGG 47519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15839166976035