Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq13764 87.8 2e-12 seq1322 87.8 2e-12 >seq13764 Length=21010 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 146940 GTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTG 146999 |||||||||||| || || | ||||| |||||||| || ||| | ||| | || | ||| Sbjct 7016 GTAGACGTGCGCATCGCCGATAGTGTGTACAAAGTCACCGGGCGTTAGGTCAGTGATGTG 6957 Query 147000 GGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || | ||||||||| || | |||||||| || |||||||| || || || || ||| Sbjct 6956 CGCAATCATGTAGGTCAGTAAGGAGTAGCTTGCAATGTTGAACGGAACGCCTAGACCC 6899 >seq1322 Length=160377 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 146940 GTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTG 146999 |||||||||||| || || | ||||| |||||||| || ||| | ||| | || | ||| Sbjct 133369 GTAGACGTGCGCATCGCCGATAGTGTGTACAAAGTCACCGGGCGTTAGGTCAGTGATGTG 133310 Query 147000 GGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || | ||||||||| | | |||||||| || |||||||| || || ||||| ||| Sbjct 133309 CGCAATCATGTAGGTCAATAAGGAGTAGCTTGCAATGTTGAATGGAACGCCCAGACCC 133252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583049049271200